Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RN7SL293P-201ENST00000481765 281 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AC006483.1-201ENST00000487308 313 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AL160314.1-201ENST00000490836 438 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 RNU6-1170P-201ENST00000515974 106 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 RNU6-1315P-201ENST00000517187 99 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AC087854.1-201ENST00000519706 414 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AP003072.1-201ENST00000531740 145 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AC007536.1-201ENST00000533382 349 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 APOOP3-201ENST00000536787 586 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 HIGD1AP1-201ENST00000550979 275 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 MIR2682-201ENST00000580305 110 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AL157817.1-201ENST00000614264 790 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AC090971.5-201ENST00000621102 293 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AL031601.2-202ENST00000622650 282 ntBASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLIP4Q8N3C7 AL353743.1-202ENST00000431724 1695 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 RNA5SP295-201ENST00000362655 121 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 RNU1-33P-201ENST00000364249 162 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 RNU6-128P-201ENST00000383976 107 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 Y_RNA.482-201ENST00000384377 111 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 RNU6-1179P-201ENST00000384667 107 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 MIR23B-201ENST00000384832 97 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 MIR200C-201ENST00000384980 68 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 RNY4P36-201ENST00000391116 96 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 AL360182.1-201ENST00000397433 468 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 MTCYBP4-201ENST00000401524 249 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 SKA2P1-201ENST00000425592 390 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 GPM6BP2-201ENST00000432046 144 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 GPM6BP1-201ENST00000446387 144 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 RPL21P10-201ENST00000463521 490 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 RN7SL499P-201ENST00000481141 276 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 RPL21P129-201ENST00000491732 478 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 ATP5F1P5-201ENST00000526403 760 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 IMMP1LP2-201ENST00000552954 492 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 MIR3158-1-201ENST00000583596 81 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 Y_RNA.812-201ENST00000610788 101 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 AL591516.1-201ENST00000611326 274 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 Y_RNA.784-201ENST00000613803 101 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 Y_RNA.787-201ENST00000616522 101 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 Y_RNA.780-201ENST00000617336 101 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 Y_RNA.801-201ENST00000619005 101 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 MIR6733-201ENST00000635723 61 ntBASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
CLIP4Q8N3C7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AC002546.1-201ENST00000588041 2504 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AC090740.1-201ENST00000623193 2262 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AC138393.1-203ENST00000327086 343 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 MIR369-201ENST00000362155 70 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 Y_RNA.245-201ENST00000364493 95 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 Y_RNA.326-201ENST00000365176 113 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 RNU6-1197P-201ENST00000391183 107 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 SNORA26.7-201ENST00000391288 122 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AC245054.2-201ENST00000415639 319 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AL590632.1-201ENST00000424289 371 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 PIGFP3-201ENST00000441918 722 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 BRK1P2-201ENST00000442875 223 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 CYCSP35-201ENST00000451978 304 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AC022493.1-201ENST00000492984 337 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AC079140.5-201ENST00000507882 310 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AC008716.1-201ENST00000511084 513 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AC005741.1-201ENST00000511094 432 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 RNA5SP290-201ENST00000517133 127 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 CASP1P1-201ENST00000526345 212 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AC025423.5-201ENST00000550230 219 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AC026371.1-201ENST00000551867 419 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AL157871.3-201ENST00000557231 293 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AC074050.1-201ENST00000563247 211 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms