Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC007458.1-201ENST00000542812 373 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 CYCSP30-201ENST00000546447 172 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 AC005476.1-201ENST00000554427 397 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 AC090517.1-201ENST00000569307 266 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
TRIM48Q8IWZ4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.84□□□□□ -1.8
TRIM48Q8IWZ4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AL359693.1-201ENST00000614959 2407 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 RNU6-336P-201ENST00000364891 107 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 SNORA62.3-201ENST00000365110 153 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 RNU6-140P-201ENST00000384566 108 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 RNU1-89P-201ENST00000384592 164 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AC098614.2-201ENST00000426040 255 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 MTCO3P29-201ENST00000432119 779 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 VDAC1P3-201ENST00000434069 851 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 NDUFS5P3-201ENST00000450668 321 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AC013470.1-201ENST00000453438 462 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 RPS29P27-201ENST00000463711 170 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AC093852.1-201ENST00000503587 266 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AC109479.2-201ENST00000517842 174 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 IGHV3-76-201ENST00000522465 295 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AC005046.1-201ENST00000608515 625 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AC009318.2-201ENST00000610917 651 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AL773545.4-201ENST00000637262 310 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AL513478.4-201ENST00000641636 310 ntBASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM48Q8IWZ4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 Y_RNA.123-201ENST00000363338 102 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 RNA5SP322-201ENST00000363617 119 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 RNU6-213P-201ENST00000384051 104 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 Y_RNA.461-201ENST00000384263 103 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 RNU6-472P-201ENST00000384299 107 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 Y_RNA.551-201ENST00000384661 102 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 MIR628-201ENST00000385229 95 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 MT-TW-201ENST00000387382 68 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 SNORA69.1-201ENST00000390904 137 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 RNU6-1197P-201ENST00000391183 107 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 SNORA57.3-201ENST00000411095 141 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 AC073910.1-201ENST00000445047 438 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 AC079354.2-201ENST00000453523 154 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 AP000873.1-201ENST00000463987 400 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 AC005357.1-201ENST00000588399 301 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 AL442067.1-201ENST00000613261 223 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 NOL8P1-201ENST00000508336 3529 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 AC233263.6-201ENST00000631132 1963 ntBASIC3.82□□□□□ -1.8
TRIM48Q8IWZ4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 FTLP6-201ENST00000355274 422 ntBASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 RNU6-78P-201ENST00000362897 107 ntBASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 Y_RNA.447-201ENST00000384184 113 ntBASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 RNU6-72P-201ENST00000384285 79 ntBASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 MIR30B-201ENST00000384850 88 ntBASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 SAR1AP2-201ENST00000392696 594 ntBASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 AL512844.2-201ENST00000433990 593 ntBASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 HMGB1P37-201ENST00000439613 609 ntBASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 SNORA25.11-201ENST00000515935 105 ntBASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 HSPE1P20-201ENST00000538133 289 ntBASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 AC034105.4-201ENST00000568304 277 ntBASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 AC006130.2-201ENST00000586202 326 ntBASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 RPS29P30-201ENST00000600975 111 ntBASIC3.81□□□□□ -1.8
TRIM48Q8IWZ4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms