Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 RNA5SP380-201ENST00000517190 98 ntBASIC3.45□□□□□ -1.86
PPP4R4Q6NUP7 AC069113.1-201ENST00000517763 267 ntBASIC3.45□□□□□ -1.86
PPP4R4Q6NUP7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.45□□□□□ -1.86
PPP4R4Q6NUP7 AC087854.1-201ENST00000519706 414 ntBASIC3.45□□□□□ -1.86
PPP4R4Q6NUP7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.45□□□□□ -1.86
PPP4R4Q6NUP7 AC087241.2-201ENST00000535801 324 ntBASIC3.45□□□□□ -1.86
PPP4R4Q6NUP7 AC025423.5-201ENST00000550230 219 ntBASIC3.45□□□□□ -1.86
PPP4R4Q6NUP7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.45□□□□□ -1.86
PPP4R4Q6NUP7 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.45□□□□□ -1.86
PPP4R4Q6NUP7 AC008121.1-201ENST00000603244 268 ntBASIC3.45□□□□□ -1.86
PPP4R4Q6NUP7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.45□□□□□ -1.86
PPP4R4Q6NUP7 RNU6-91P-201ENST00000607774 107 ntBASIC3.45□□□□□ -1.86
PPP4R4Q6NUP7 AL138726.1-201ENST00000614873 333 ntBASIC3.45□□□□□ -1.86
PPP4R4Q6NUP7 AL133216.2-202ENST00000634512 349 ntBASIC3.45□□□□□ -1.86
PPP4R4Q6NUP7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
PPP4R4Q6NUP7 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.45□□□□□ -1.86
PPP4R4Q6NUP7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PPP4R4Q6NUP7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AL109809.4-201ENST00000603520 2185 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 CBX3P1-201ENST00000325243 554 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 RNU6-845P-201ENST00000362578 103 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 Y_RNA.301-201ENST00000364990 103 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 RNU6-213P-201ENST00000384051 104 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 RNU6-767P-201ENST00000384132 107 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 MIR23B-201ENST00000384832 97 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 RNA5SP424-201ENST00000390988 115 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AC005019.1-201ENST00000436455 431 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AL353572.1-201ENST00000442490 417 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 RPL7P12-201ENST00000446719 750 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AC013470.1-201ENST00000453438 462 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 RPS4XP2-201ENST00000458402 793 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AP001324.2-201ENST00000461163 319 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 RN7SL542P-201ENST00000467147 294 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 MTCYBP40-201ENST00000509390 1135 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 RN7SKP256-201ENST00000517201 314 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 COPS8P3-201ENST00000526024 482 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AP000889.2-201ENST00000532684 490 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AC005730.3-201ENST00000583067 366 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 ELOCP5-201ENST00000604924 333 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 U4.7-201ENST00000638126 106 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AL513302.2-201ENST00000562313 1842 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 AC068647.1-201ENST00000489539 2265 ntBASIC3.44□□□□□ -1.86
PPP4R4Q6NUP7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 SNORA73.2-201ENST00000364946 201 ntBASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 SET-203ENST00000372688 801 ntTSL 2 BASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 MIR627-201ENST00000384979 97 ntBASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 MTND3P8-201ENST00000412909 339 ntBASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 AC093151.1-201ENST00000427711 313 ntBASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 AC098614.3-201ENST00000438957 440 ntBASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 AL359672.1-201ENST00000442302 409 ntBASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 RPL32P28-201ENST00000443577 397 ntBASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 MTND3P10-201ENST00000450967 341 ntBASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 AC006026.2-201ENST00000457376 180 ntBASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 SNORA84-201ENST00000459229 133 ntBASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 MED28P2-201ENST00000475771 317 ntBASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 AC026464.5-201ENST00000562497 722 ntBASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 AC087499.8-201ENST00000578406 226 ntBASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 AC064836.2-201ENST00000609491 462 ntBASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 MTND5P27-201ENST00000428871 1720 ntBASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.43□□□□□ -1.86
PPP4R4Q6NUP7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 Y_RNA.166-201ENST00000363730 102 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 Y_RNA.212-201ENST00000364177 102 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 RNU6-461P-201ENST00000364195 107 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 RNU6-843P-201ENST00000384454 104 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 RPL35AP12-201ENST00000425362 338 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 AC021205.2-201ENST00000480069 347 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 TRBVA-201ENST00000498804 316 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 AC091951.2-201ENST00000500762 203 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 AC008628.2-201ENST00000502605 298 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms