Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 Z83843.1-201ENST00000604070 3685 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC38Q502W7 Y_RNA.256-201ENST00000364594 104 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 MIR183-201ENST00000384958 110 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 RNA5SP219-201ENST00000390940 113 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 POLHP1-201ENST00000411806 470 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 RPL7P37-201ENST00000425095 738 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 ERLEC1P1-201ENST00000433806 578 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 MTATP6P13-201ENST00000438531 667 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 FGF7P6-202ENST00000451282 293 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 AC006026.2-201ENST00000457376 180 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 GZMAP1-201ENST00000503054 631 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC38Q502W7 HIGD1AP13-201ENST00000509878 289 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 AC114781.4-201ENST00000513707 639 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 RNU6-189P-201ENST00000516120 101 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 RNU6-1038P-201ENST00000516516 104 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 SNORA70.24-201ENST00000517233 118 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 CYCSP27-201ENST00000527643 293 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC38Q502W7 AC078814.3-201ENST00000553036 491 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC38Q502W7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC38Q502W7 NRBF2P5-201ENST00000603087 788 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 AC107304.1-201ENST00000604229 296 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 AL161756.2-201ENST00000604597 246 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 RNU6-89P-201ENST00000606519 100 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 AC002044.1-201ENST00000606707 158 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 AL627309.6-201ENST00000606857 840 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC38Q502W7 AC096577.2-201ENST00000611455 153 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 AC011890.2-201ENST00000613393 294 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 AC007014.2-201ENST00000615581 479 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 AC103705.1-201ENST00000619013 241 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 AC090617.7-201ENST00000623952 126 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 Z69720.2-201ENST00000624755 279 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 U6.105-201ENST00000637379 88 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC38Q502W7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC38Q502W7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC38Q502W7 MTND5P1-201ENST00000445440 1375 ntBASIC3.25□□□□□ -1.89
CCDC38Q502W7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
CCDC38Q502W7 RNU6-266P-201ENST00000364225 107 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 Y_RNA.378-201ENST00000365652 113 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC38Q502W7 RNU6-748P-201ENST00000384648 107 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC38Q502W7 FTH1P15-201ENST00000406984 280 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 RPLP0P7-201ENST00000416050 667 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC38Q502W7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC38Q502W7 SRIP2-201ENST00000428470 166 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 AC097713.2-201ENST00000430199 356 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC38Q502W7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC38Q502W7 AL441985.1-201ENST00000457727 251 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 RNU6-1208P-201ENST00000459588 107 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 RPL27AP5-201ENST00000469428 449 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC38Q502W7 SCARNA11.3-201ENST00000517276 130 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 AC069113.1-201ENST00000517763 267 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC38Q502W7 GLYCAM1-201ENST00000546596 285 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 VN1R80P-201ENST00000597126 338 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 AC092747.3-201ENST00000603769 301 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 AC073657.2-201ENST00000605661 303 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 AC104458.1-201ENST00000608243 463 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 AC092807.2-201ENST00000609367 243 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CCDC38Q502W7 AC024614.3-201ENST00000637860 256 ntBASIC3.24□□□□□ -1.89
CCDC38Q502W7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC38Q502W7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC38Q502W7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC38Q502W7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC38Q502W7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC38Q502W7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC38Q502W7 RNU6-942P-201ENST00000363002 107 ntBASIC3.23□□□□□ -1.89
CCDC38Q502W7 RNU6-525P-201ENST00000363685 104 ntBASIC3.23□□□□□ -1.89
CCDC38Q502W7 RNU6-373P-201ENST00000411247 98 ntBASIC3.23□□□□□ -1.89
CCDC38Q502W7 RPL7P10-201ENST00000417407 739 ntBASIC3.23□□□□□ -1.89
CCDC38Q502W7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC38Q502W7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC38Q502W7 AC104332.2-201ENST00000429959 156 ntBASIC3.23□□□□□ -1.89
CCDC38Q502W7 AC005019.1-201ENST00000436455 431 ntBASIC3.23□□□□□ -1.89
CCDC38Q502W7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC38Q502W7 RPS12P18-201ENST00000442381 270 ntBASIC3.23□□□□□ -1.89
CCDC38Q502W7 GSTA11P-201ENST00000452866 669 ntBASIC3.23□□□□□ -1.89
CCDC38Q502W7 MRPL42P6-201ENST00000486397 371 ntBASIC3.23□□□□□ -1.89
CCDC38Q502W7 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.23□□□□□ -1.89
CCDC38Q502W7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC38Q502W7 RNU5F-8P-201ENST00000515941 111 ntBASIC3.23□□□□□ -1.89
CCDC38Q502W7 SNORA14.1-201ENST00000516113 141 ntBASIC3.23□□□□□ -1.89
CCDC38Q502W7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC38Q502W7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC38Q502W7 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC38Q502W7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC38Q502W7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC38Q502W7 SNORA59B-202ENST00000578183 701 ntBASIC3.23□□□□□ -1.89
CCDC38Q502W7 MIR2682-201ENST00000580305 110 ntBASIC3.23□□□□□ -1.89
CCDC38Q502W7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms