Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AC002543.1-201ENST00000299783 1954 ntBASIC1.45□□□□□ -2.18
USF2Q15853 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.45□□□□□ -2.18
USF2Q15853 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
USF2Q15853 RNU5A-8P-201ENST00000364102 114 ntBASIC1.44□□□□□ -2.18
USF2Q15853 RNU6-621P-201ENST00000364752 109 ntBASIC1.44□□□□□ -2.18
USF2Q15853 SNORA4.3-201ENST00000365564 137 ntBASIC1.44□□□□□ -2.18
USF2Q15853 AC009518.2-201ENST00000418056 731 ntBASIC1.44□□□□□ -2.18
USF2Q15853 AP000949.1-201ENST00000438328 629 ntBASIC1.44□□□□□ -2.18
USF2Q15853 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.44□□□□□ -2.18
USF2Q15853 AC108059.3-201ENST00000456388 214 ntBASIC1.44□□□□□ -2.18
USF2Q15853 MTND1P3-201ENST00000484956 952 ntBASIC1.44□□□□□ -2.18
USF2Q15853 RPL38P4-201ENST00000502376 214 ntBASIC1.44□□□□□ -2.18
USF2Q15853 SUMO2P5-201ENST00000506790 245 ntBASIC1.44□□□□□ -2.18
USF2Q15853 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.44□□□□□ -2.18
USF2Q15853 RPS3AP4-201ENST00000555161 764 ntBASIC1.44□□□□□ -2.18
USF2Q15853 MTCYBP33-201ENST00000575007 1130 ntBASIC1.44□□□□□ -2.18
USF2Q15853 AL161722.3-201ENST00000605789 2983 ntBASIC1.44□□□□□ -2.18
USF2Q15853 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.44□□□□□ -2.18
USF2Q15853 MIR3529-201ENST00000637713 78 ntBASIC1.44□□□□□ -2.18
USF2Q15853 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.44□□□□□ -2.18
USF2Q15853 RNU6-655P-201ENST00000362858 107 ntBASIC1.43□□□□□ -2.18
USF2Q15853 RNU6-944P-201ENST00000364023 107 ntBASIC1.43□□□□□ -2.18
USF2Q15853 SNORA16.1-201ENST00000364597 132 ntBASIC1.43□□□□□ -2.18
USF2Q15853 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
USF2Q15853 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.43□□□□□ -2.18
USF2Q15853 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.43□□□□□ -2.18
USF2Q15853 SRIP3-201ENST00000413200 219 ntBASIC1.43□□□□□ -2.18
USF2Q15853 VPS26BP1-201ENST00000417155 755 ntBASIC1.43□□□□□ -2.18
USF2Q15853 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.43□□□□□ -2.18
USF2Q15853 AL591212.2-201ENST00000433923 257 ntBASIC1.43□□□□□ -2.18
USF2Q15853 AL117351.1-201ENST00000438864 766 ntBASIC1.43□□□□□ -2.18
USF2Q15853 AL121594.1-201ENST00000475906 575 ntBASIC1.43□□□□□ -2.18
USF2Q15853 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.43□□□□□ -2.18
USF2Q15853 RNU6-1315P-201ENST00000517187 99 ntBASIC1.43□□□□□ -2.18
USF2Q15853 AC084824.5-201ENST00000612009 413 ntBASIC1.43□□□□□ -2.18
USF2Q15853 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.43□□□□□ -2.18
USF2Q15853 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
USF2Q15853 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.42□□□□□ -2.18
USF2Q15853 Y_RNA.110-201ENST00000363220 99 ntBASIC1.42□□□□□ -2.18
USF2Q15853 RNA5SP88-201ENST00000365560 109 ntBASIC1.42□□□□□ -2.18
USF2Q15853 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USF2Q15853 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
USF2Q15853 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
USF2Q15853 RNU2-36P-201ENST00000410361 191 ntBASIC1.42□□□□□ -2.18
USF2Q15853 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.42□□□□□ -2.18
USF2Q15853 AC068587.2-201ENST00000478386 781 ntBASIC1.42□□□□□ -2.18
USF2Q15853 RPL21P99-201ENST00000480369 423 ntBASIC1.42□□□□□ -2.18
USF2Q15853 AC007182.2-201ENST00000489251 402 ntBASIC1.42□□□□□ -2.18
USF2Q15853 AC109445.1-201ENST00000512356 383 ntBASIC1.42□□□□□ -2.18
USF2Q15853 AC109329.1-201ENST00000518744 317 ntBASIC1.42□□□□□ -2.18
USF2Q15853 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
USF2Q15853 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.42□□□□□ -2.18
USF2Q15853 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.42□□□□□ -2.18
USF2Q15853 MIR3618-201ENST00000580330 88 ntBASIC1.42□□□□□ -2.18
USF2Q15853 BNIP3P27-201ENST00000599991 412 ntBASIC1.42□□□□□ -2.18
USF2Q15853 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.42□□□□□ -2.18
USF2Q15853 uc_338.5-201ENST00000611839 155 ntBASIC1.42□□□□□ -2.18
USF2Q15853 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
USF2Q15853 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
USF2Q15853 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
USF2Q15853 ZNF355P-201ENST00000427301 3216 ntBASIC1.41□□□□□ -2.18
USF2Q15853 Y_RNA.67-201ENST00000362870 100 ntBASIC1.41□□□□□ -2.18
USF2Q15853 RNU6-529P-201ENST00000363383 104 ntBASIC1.41□□□□□ -2.18
USF2Q15853 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
USF2Q15853 RNU6-843P-201ENST00000384454 104 ntBASIC1.41□□□□□ -2.18
USF2Q15853 RN7SKP266-201ENST00000410232 287 ntBASIC1.41□□□□□ -2.18
USF2Q15853 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.41□□□□□ -2.18
USF2Q15853 SDAD1P3-201ENST00000427380 333 ntBASIC1.41□□□□□ -2.18
USF2Q15853 AL606517.1-201ENST00000446914 387 ntBASIC1.41□□□□□ -2.18
USF2Q15853 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.41□□□□□ -2.18
USF2Q15853 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.41□□□□□ -2.18
USF2Q15853 AC021146.8-201ENST00000507455 733 ntBASIC1.41□□□□□ -2.18
USF2Q15853 TPT1P8-201ENST00000510120 555 ntBASIC1.41□□□□□ -2.18
USF2Q15853 AC079395.1-201ENST00000510981 262 ntBASIC1.41□□□□□ -2.18
USF2Q15853 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.41□□□□□ -2.18
USF2Q15853 RNVU1-2-201ENST00000516326 135 ntBASIC1.41□□□□□ -2.18
USF2Q15853 RNU6-914P-201ENST00000516749 109 ntBASIC1.41□□□□□ -2.18
USF2Q15853 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.41□□□□□ -2.18
USF2Q15853 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.41□□□□□ -2.18
USF2Q15853 AL160236.1-201ENST00000556317 195 ntBASIC1.41□□□□□ -2.18
USF2Q15853 AL157871.3-201ENST00000557231 293 ntBASIC1.41□□□□□ -2.18
USF2Q15853 AC092325.1-201ENST00000566449 554 ntBASIC1.41□□□□□ -2.18
USF2Q15853 AC010900.2-201ENST00000604508 210 ntBASIC1.41□□□□□ -2.18
USF2Q15853 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.41□□□□□ -2.18
USF2Q15853 MTND5P42-201ENST00000637720 498 ntBASIC1.41□□□□□ -2.18
USF2Q15853 ZNF680P1-201ENST00000436625 1469 ntBASIC1.41□□□□□ -2.18
USF2Q15853 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
USF2Q15853 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
USF2Q15853 FARSBP1-201ENST00000435808 1778 ntBASIC1.4□□□□□ -2.19
USF2Q15853 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.4□□□□□ -2.19
USF2Q15853 Y_RNA.33-201ENST00000362591 102 ntBASIC1.4□□□□□ -2.19
USF2Q15853 Y_RNA.534-201ENST00000384599 112 ntBASIC1.4□□□□□ -2.19
USF2Q15853 SNORA48.1-201ENST00000390879 135 ntBASIC1.4□□□□□ -2.19
USF2Q15853 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.4□□□□□ -2.19
USF2Q15853 RNA5SP100-201ENST00000410903 110 ntBASIC1.4□□□□□ -2.19
USF2Q15853 RNA5SP59-201ENST00000410922 110 ntBASIC1.4□□□□□ -2.19
USF2Q15853 RNU2-72P-201ENST00000411175 163 ntBASIC1.4□□□□□ -2.19
USF2Q15853 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.4□□□□□ -2.19
USF2Q15853 AL445669.1-201ENST00000426743 755 ntBASIC1.4□□□□□ -2.19
USF2Q15853 AL354941.1-201ENST00000438600 464 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms