Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SOX4Q06945 RNU6-222P-201ENST00000362438 107 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 RNU6-704P-201ENST00000364162 103 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 RNY1P5-201ENST00000383890 115 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 RNU6-166P-201ENST00000384371 107 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SOX4Q06945 BTF3L4P2-201ENST00000392798 346 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 Z85995.1-201ENST00000415547 335 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 AL451074.5-201ENST00000415894 435 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 AC007560.1-201ENST00000426912 237 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 AC016700.2-201ENST00000446011 156 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.36□□□□□ -1.71
SOX4Q06945 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.36□□□□□ -1.71
SOX4Q06945 AC139453.3-201ENST00000493276 369 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 Y_RNA.662-201ENST00000516028 97 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 SCARNA15.2-201ENST00000516409 127 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 RNU2-31P-201ENST00000516954 155 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 RNA5SP290-201ENST00000517133 127 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.36□□□□□ -1.71
SOX4Q06945 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.36□□□□□ -1.71
SOX4Q06945 AC034105.4-201ENST00000568304 277 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 MIR4458-201ENST00000578872 75 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 MIR1254-2-201ENST00000579553 63 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 AC006130.2-201ENST00000586202 326 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 AC010928.2-201ENST00000588017 287 ntBASIC4.36□□□□□ -1.71
SOX4Q06945 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.36□□□□□ -1.71
SOX4Q06945 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SOX4Q06945 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.36□□□□□ -1.71
SOX4Q06945 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SOX4Q06945 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX4Q06945 AC233981.2-201ENST00000611524 1614 ntBASIC4.35□□□□□ -1.71
SOX4Q06945 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.35□□□□□ -1.71
SOX4Q06945 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX4Q06945 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SOX4Q06945 MAPK10-320ENST00000641462 6696 ntBASIC4.35□□□□□ -1.71
SOX4Q06945 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SOX4Q06945 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX4Q06945 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.35□□□□□ -1.71
SOX4Q06945 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX4Q06945 RN7SKP51-201ENST00000410781 304 ntBASIC4.35□□□□□ -1.71
SOX4Q06945 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.35□□□□□ -1.71
SOX4Q06945 snoU109.2-201ENST00000459316 135 ntBASIC4.35□□□□□ -1.71
SOX4Q06945 RPL21P104-201ENST00000464143 478 ntBASIC4.35□□□□□ -1.71
SOX4Q06945 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.35□□□□□ -1.71
SOX4Q06945 RPL29P14-201ENST00000495837 428 ntBASIC4.35□□□□□ -1.71
SOX4Q06945 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.35□□□□□ -1.71
SOX4Q06945 SNORA31.18-201ENST00000517043 134 ntBASIC4.35□□□□□ -1.71
SOX4Q06945 ATP5F1P5-201ENST00000526403 760 ntBASIC4.35□□□□□ -1.71
SOX4Q06945 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX4Q06945 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.35□□□□□ -1.71
SOX4Q06945 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.35□□□□□ -1.71
SOX4Q06945 AC025627.2-201ENST00000576220 160 ntBASIC4.35□□□□□ -1.71
SOX4Q06945 AL606490.9-201ENST00000603331 271 ntBASIC4.35□□□□□ -1.71
SOX4Q06945 SNORD113-5-201ENST00000607261 78 ntBASIC4.35□□□□□ -1.71
SOX4Q06945 AC099669.2-201ENST00000616549 437 ntBASIC4.35□□□□□ -1.71
SOX4Q06945 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX4Q06945 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SOX4Q06945 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.35□□□□□ -1.71
SOX4Q06945 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX4Q06945 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.35□□□□□ -1.71
SOX4Q06945 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.35□□□□□ -1.71
SOX4Q06945 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX4Q06945 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX4Q06945 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SOX4Q06945 Z82217.1-201ENST00000625157 8149 ntBASIC4.35□□□□□ -1.71
SOX4Q06945 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX4Q06945 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX4Q06945 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SOX4Q06945 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SOX4Q06945 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.34□□□□□ -1.71
SOX4Q06945 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.34□□□□□ -1.71
SOX4Q06945 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SOX4Q06945 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SOX4Q06945 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX4Q06945 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX4Q06945 SNORA60-201ENST00000362396 134 ntBASIC4.34□□□□□ -1.71
SOX4Q06945 SNORD35B-201ENST00000363660 87 ntBASIC4.34□□□□□ -1.71
SOX4Q06945 Y_RNA.286-201ENST00000364813 102 ntBASIC4.34□□□□□ -1.71
SOX4Q06945 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX4Q06945 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.34□□□□□ -1.71
SOX4Q06945 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.34□□□□□ -1.71
SOX4Q06945 AC005002.2-201ENST00000438228 269 ntBASIC4.34□□□□□ -1.71
SOX4Q06945 AC092798.1-201ENST00000458542 409 ntBASIC4.34□□□□□ -1.71
SOX4Q06945 AC091021.1-201ENST00000468051 388 ntBASIC4.34□□□□□ -1.71
SOX4Q06945 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.34□□□□□ -1.71
SOX4Q06945 AC020593.1-201ENST00000507399 299 ntBASIC4.34□□□□□ -1.71
SOX4Q06945 AC010265.1-201ENST00000513509 211 ntBASIC4.34□□□□□ -1.71
SOX4Q06945 RNU7-200P-201ENST00000516105 62 ntBASIC4.34□□□□□ -1.71
SOX4Q06945 RNU6-1256P-201ENST00000516539 103 ntBASIC4.34□□□□□ -1.71
SOX4Q06945 RNU6-572P-201ENST00000516724 80 ntBASIC4.34□□□□□ -1.71
SOX4Q06945 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.34□□□□□ -1.71
SOX4Q06945 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.34□□□□□ -1.71
SOX4Q06945 MIR432-201ENST00000606207 94 ntBASIC4.34□□□□□ -1.71
SOX4Q06945 AC037487.3-201ENST00000606668 112 ntBASIC4.34□□□□□ -1.71
SOX4Q06945 AL590240.4-201ENST00000616908 390 ntBASIC4.34□□□□□ -1.71
SOX4Q06945 MIR7702-201ENST00000621931 59 ntBASIC4.34□□□□□ -1.71
SOX4Q06945 MIR6715B-201ENST00000637172 77 ntBASIC4.34□□□□□ -1.71
SOX4Q06945 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX4Q06945 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SOX4Q06945 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms