Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MIR3167-201ENST00000579623 85 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 MIR3945-201ENST00000581853 98 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 AL391813.1-201ENST00000603098 260 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 AC091152.3-201ENST00000604227 325 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 AC019226.2-201ENST00000625973 424 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 AC025048.6-202ENST00000627667 438 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 MIR219B-201ENST00000637023 88 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMGCS1Q01581 MTND4P1-201ENST00000457501 1466 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMGCS1Q01581 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HMGCS1Q01581 Y_RNA.22-201ENST00000362492 102 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 SNORA75B-201ENST00000384053 137 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 RNU6-190P-201ENST00000384154 102 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 RPS3AP36-201ENST00000398190 775 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 AL049545.1-201ENST00000401856 572 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 AC127391.1-201ENST00000411737 98 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 MTND1P23-201ENST00000416931 372 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.92□□□□□ -2.1
HMGCS1Q01581 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.92□□□□□ -2.1
HMGCS1Q01581 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.92□□□□□ -2.1
HMGCS1Q01581 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGCS1Q01581 AL591704.1-201ENST00000432574 275 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.92□□□□□ -2.1
HMGCS1Q01581 GPM6BP3-201ENST00000442797 145 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 RPS27AP8-201ENST00000452665 445 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 AC092001.1-201ENST00000453012 261 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 SNRPGP9-201ENST00000456025 225 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 RPS29P21-201ENST00000496272 170 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 FAM92A1P2-202ENST00000504766 877 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGCS1Q01581 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.92□□□□□ -2.1
HMGCS1Q01581 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGCS1Q01581 MIR5089-201ENST00000580047 84 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.92□□□□□ -2.1
HMGCS1Q01581 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGCS1Q01581 AC174048.1-201ENST00000603389 144 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 AL158032.1-201ENST00000605401 106 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.92□□□□□ -2.1
HMGCS1Q01581 AL133173.2-201ENST00000614270 90 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 AC008250.2-201ENST00000615261 205 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 AL031601.2-202ENST00000622650 282 ntBASIC1.92□□□□□ -2.1
HMGCS1Q01581 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.92□□□□□ -2.1
HMGCS1Q01581 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.91□□□□□ -2.1
HMGCS1Q01581 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.91□□□□□ -2.1
HMGCS1Q01581 AC073343.1-201ENST00000328239 651 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 RNA5SP125-201ENST00000364843 120 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 RNU6-169P-201ENST00000365336 107 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 RNU6-898P-201ENST00000365627 104 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 SNORA20.2-201ENST00000383922 131 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 RNU4-52P-201ENST00000384209 138 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 RNU6-297P-201ENST00000384636 107 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 MIR558-201ENST00000384920 94 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 MIR301A-201ENST00000385261 86 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 SNORA40.3-201ENST00000390964 122 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
HMGCS1Q01581 RNU6-1025P-201ENST00000410629 104 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 HMGN1P14-201ENST00000412459 517 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGCS1Q01581 EIF4EP4-201ENST00000424916 578 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 Z98742.2-201ENST00000431564 187 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGCS1Q01581 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.91□□□□□ -2.1
HMGCS1Q01581 GAPDHP17-201ENST00000449858 1001 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGCS1Q01581 MTCO2P6-201ENST00000463134 685 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 AC090515.1-201ENST00000465295 476 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 BET1P1-201ENST00000482276 359 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.91□□□□□ -2.1
HMGCS1Q01581 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGCS1Q01581 SCARNA24.1-201ENST00000516465 137 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 RNU7-193P-201ENST00000516723 65 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 SNORA31.19-201ENST00000517079 126 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.91□□□□□ -2.1
HMGCS1Q01581 AC026407.1-201ENST00000518369 204 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 AL157871.3-201ENST00000557231 293 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 AC027807.1-201ENST00000559921 996 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGCS1Q01581 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGCS1Q01581 MIR1273C-201ENST00000578669 77 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 AC126118.1-201ENST00000607744 628 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 AL161423.1-201ENST00000613700 262 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 AC010678.1-201ENST00000614118 713 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGCS1Q01581 AC110994.2-201ENST00000635481 492 ntBASIC1.91□□□□□ -2.1
HMGCS1Q01581 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMGCS1Q01581 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HMGCS1Q01581 U3.4-201ENST00000363352 213 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 SNORA24.1-201ENST00000384401 135 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 RNY3P10-201ENST00000384764 102 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 SNORA40C-201ENST00000391285 128 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.9□□□□□ -2.11
HMGCS1Q01581 RNU2-39P-201ENST00000410604 198 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGCS1Q01581 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGCS1Q01581 ISCA1P6-201ENST00000427740 390 ntBASIC1.9□□□□□ -2.11
HMGCS1Q01581 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms