Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC090578.1-201ENST00000604955 591 ntBASIC2.35□□□□□ -2.03
SRP54P61011 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.35□□□□□ -2.03
SRP54P61011 U6.42-201ENST00000618440 107 ntBASIC2.35□□□□□ -2.03
SRP54P61011 AC010378.1-201ENST00000619270 362 ntBASIC2.35□□□□□ -2.03
SRP54P61011 AC019226.2-201ENST00000625973 424 ntBASIC2.35□□□□□ -2.03
SRP54P61011 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.35□□□□□ -2.03
SRP54P61011 FARSBP1-201ENST00000435808 1778 ntBASIC2.34□□□□□ -2.03
SRP54P61011 FGF7P2-201ENST00000332473 296 ntBASIC2.34□□□□□ -2.03
SRP54P61011 U8.2-201ENST00000363156 134 ntBASIC2.34□□□□□ -2.03
SRP54P61011 RNU6-179P-201ENST00000363350 107 ntBASIC2.34□□□□□ -2.03
SRP54P61011 Y_RNA.169-201ENST00000363745 96 ntBASIC2.34□□□□□ -2.03
SRP54P61011 SNORD14B-201ENST00000364533 90 ntBASIC2.34□□□□□ -2.03
SRP54P61011 RNY4P34-201ENST00000364779 95 ntBASIC2.34□□□□□ -2.03
SRP54P61011 MIR524-201ENST00000385242 87 ntBASIC2.34□□□□□ -2.03
SRP54P61011 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.34□□□□□ -2.03
SRP54P61011 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
SRP54P61011 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SRP54P61011 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.34□□□□□ -2.03
SRP54P61011 AF274854.1-201ENST00000413236 615 ntBASIC2.34□□□□□ -2.03
SRP54P61011 AL031779.1-201ENST00000415663 330 ntBASIC2.34□□□□□ -2.03
SRP54P61011 AL135786.1-201ENST00000415892 214 ntBASIC2.34□□□□□ -2.03
SRP54P61011 AC016831.2-201ENST00000417179 352 ntBASIC2.34□□□□□ -2.03
SRP54P61011 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.34□□□□□ -2.03
SRP54P61011 AC009961.2-201ENST00000435771 251 ntBASIC2.34□□□□□ -2.03
SRP54P61011 AL353706.1-201ENST00000436728 494 ntBASIC2.34□□□□□ -2.03
SRP54P61011 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.34□□□□□ -2.03
SRP54P61011 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.34□□□□□ -2.03
SRP54P61011 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.34□□□□□ -2.03
SRP54P61011 RNA5SP269-201ENST00000459032 137 ntBASIC2.34□□□□□ -2.03
SRP54P61011 RPL7P43-201ENST00000478876 753 ntBASIC2.34□□□□□ -2.03
SRP54P61011 MTAPP1-201ENST00000489154 819 ntBASIC2.34□□□□□ -2.03
SRP54P61011 AC116562.3-201ENST00000506136 177 ntBASIC2.34□□□□□ -2.03
SRP54P61011 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.34□□□□□ -2.03
SRP54P61011 SMURF2P1-201ENST00000514992 481 ntBASIC2.34□□□□□ -2.03
SRP54P61011 RNU1-41P-201ENST00000516161 162 ntBASIC2.34□□□□□ -2.03
SRP54P61011 RNU1-48P-201ENST00000516400 162 ntBASIC2.34□□□□□ -2.03
SRP54P61011 RNA5SP281-201ENST00000516504 135 ntBASIC2.34□□□□□ -2.03
SRP54P61011 RNU6-1220P-201ENST00000517126 108 ntBASIC2.34□□□□□ -2.03
SRP54P61011 AC068587.5-201ENST00000528506 175 ntBASIC2.34□□□□□ -2.03
SRP54P61011 DUXAP5-201ENST00000529668 529 ntBASIC2.34□□□□□ -2.03
SRP54P61011 AC087883.1-201ENST00000551882 391 ntBASIC2.34□□□□□ -2.03
SRP54P61011 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.34□□□□□ -2.03
SRP54P61011 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.34□□□□□ -2.03
SRP54P61011 AC008521.1-201ENST00000587471 187 ntBASIC2.34□□□□□ -2.03
SRP54P61011 AC068276.1-201ENST00000605793 379 ntBASIC2.34□□□□□ -2.03
SRP54P61011 AC096772.1-201ENST00000609146 564 ntBASIC2.34□□□□□ -2.03
SRP54P61011 AC087241.4-201ENST00000612441 480 ntBASIC2.34□□□□□ -2.03
SRP54P61011 U4atac.1-201ENST00000618345 95 ntBASIC2.34□□□□□ -2.03
SRP54P61011 MIR203B-201ENST00000636080 86 ntBASIC2.34□□□□□ -2.03
SRP54P61011 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SRP54P61011 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SRP54P61011 CKAP2P1-201ENST00000555477 2049 ntBASIC2.34□□□□□ -2.04
SRP54P61011 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.34□□□□□ -2.04
SRP54P61011 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.34□□□□□ -2.04
SRP54P61011 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SRP54P61011 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SRP54P61011 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SRP54P61011 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SRP54P61011 SNORD3E-201ENST00000362899 217 ntBASIC2.33□□□□□ -2.04
SRP54P61011 SNORA40.3-201ENST00000390964 122 ntBASIC2.33□□□□□ -2.04
SRP54P61011 SNORA26.8-201ENST00000391306 124 ntBASIC2.33□□□□□ -2.04
SRP54P61011 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.33□□□□□ -2.04
SRP54P61011 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.33□□□□□ -2.04
SRP54P61011 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.33□□□□□ -2.04
SRP54P61011 MTCYBP5-201ENST00000423752 1135 ntBASIC2.33□□□□□ -2.04
SRP54P61011 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.33□□□□□ -2.04
SRP54P61011 RPL7P12-201ENST00000446719 750 ntBASIC2.33□□□□□ -2.04
SRP54P61011 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.33□□□□□ -2.04
SRP54P61011 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SRP54P61011 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.33□□□□□ -2.04
SRP54P61011 AL139109.1-201ENST00000455491 297 ntBASIC2.33□□□□□ -2.04
SRP54P61011 SNORD42A-201ENST00000459584 64 ntBASIC2.33□□□□□ -2.04
SRP54P61011 MED28P2-201ENST00000475771 317 ntBASIC2.33□□□□□ -2.04
SRP54P61011 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.33□□□□□ -2.04
SRP54P61011 RNU6-685P-201ENST00000517088 95 ntBASIC2.33□□□□□ -2.04
SRP54P61011 AC090572.1-201ENST00000519251 160 ntBASIC2.33□□□□□ -2.04
SRP54P61011 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.33□□□□□ -2.04
SRP54P61011 AP004607.1-201ENST00000524456 203 ntBASIC2.33□□□□□ -2.04
SRP54P61011 RANP3-201ENST00000530970 276 ntBASIC2.33□□□□□ -2.04
SRP54P61011 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.33□□□□□ -2.04
SRP54P61011 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.33□□□□□ -2.04
SRP54P61011 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.33□□□□□ -2.04
SRP54P61011 AL121992.2-201ENST00000606262 256 ntBASIC2.33□□□□□ -2.04
SRP54P61011 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
SRP54P61011 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.33□□□□□ -2.04
SRP54P61011 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SRP54P61011 AC091931.1-201ENST00000623488 728 ntBASIC2.33□□□□□ -2.04
SRP54P61011 AP003400.5-201ENST00000624827 617 ntBASIC2.33□□□□□ -2.04
SRP54P61011 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SRP54P61011 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SRP54P61011 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
SRP54P61011 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
SRP54P61011 OR56A5-201ENST00000340110 738 ntBASIC2.32□□□□□ -2.04
SRP54P61011 RNU6-72P-201ENST00000384285 79 ntBASIC2.32□□□□□ -2.04
SRP54P61011 RNY3P10-201ENST00000384764 102 ntBASIC2.32□□□□□ -2.04
SRP54P61011 MIR1261-201ENST00000408659 82 ntBASIC2.32□□□□□ -2.04
SRP54P61011 RNA5SP425-201ENST00000410336 112 ntBASIC2.32□□□□□ -2.04
SRP54P61011 RNU2-63P-201ENST00000410792 194 ntBASIC2.32□□□□□ -2.04
SRP54P61011 NPM1P11-201ENST00000417106 855 ntBASIC2.32□□□□□ -2.04
SRP54P61011 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms