Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU6-1038P-201ENST00000516516 104 ntBASIC2.69□□□□□ -1.98
CDH11P55287 RNU6-572P-201ENST00000516724 80 ntBASIC2.69□□□□□ -1.98
CDH11P55287 RNU6-711P-201ENST00000517255 106 ntBASIC2.69□□□□□ -1.98
CDH11P55287 AC009812.2-201ENST00000517657 457 ntBASIC2.69□□□□□ -1.98
CDH11P55287 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH11P55287 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH11P55287 AF235103.2-201ENST00000525753 346 ntBASIC2.69□□□□□ -1.98
CDH11P55287 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH11P55287 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH11P55287 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH11P55287 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH11P55287 AL137843.1-201ENST00000605078 385 ntBASIC2.69□□□□□ -1.98
CDH11P55287 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
CDH11P55287 AC007318.2-201ENST00000620999 243 ntBASIC2.69□□□□□ -1.98
CDH11P55287 DUXAP9-208ENST00000622815 614 ntBASIC2.69□□□□□ -1.98
CDH11P55287 AC022418.1-201ENST00000624118 445 ntBASIC2.69□□□□□ -1.98
CDH11P55287 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH11P55287 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH11P55287 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH11P55287 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CDH11P55287 AC092435.3-201ENST00000565538 3654 ntBASIC2.69□□□□□ -1.98
CDH11P55287 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
CDH11P55287 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH11P55287 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDH11P55287 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.68□□□□□ -1.98
CDH11P55287 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDH11P55287 AC000403.1-201ENST00000613696 3585 ntBASIC2.68□□□□□ -1.98
CDH11P55287 RPL9P7-201ENST00000330965 580 ntBASIC2.68□□□□□ -1.98
CDH11P55287 MIR412-201ENST00000362142 91 ntBASIC2.68□□□□□ -1.98
CDH11P55287 SNORA71.1-201ENST00000364523 117 ntBASIC2.68□□□□□ -1.98
CDH11P55287 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.68□□□□□ -1.98
CDH11P55287 RNU6-198P-201ENST00000384258 104 ntBASIC2.68□□□□□ -1.98
CDH11P55287 MIR181B1-201ENST00000385240 110 ntBASIC2.68□□□□□ -1.98
CDH11P55287 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CDH11P55287 RNU6-332P-201ENST00000391193 108 ntBASIC2.68□□□□□ -1.98
CDH11P55287 AL122016.1-201ENST00000403365 367 ntBASIC2.68□□□□□ -1.98
CDH11P55287 RNU6-1148P-201ENST00000410992 104 ntBASIC2.68□□□□□ -1.98
CDH11P55287 BPY2DP-201ENST00000422208 265 ntBASIC2.68□□□□□ -1.98
CDH11P55287 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH11P55287 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.68□□□□□ -1.98
CDH11P55287 RPL35AP12-201ENST00000425362 338 ntBASIC2.68□□□□□ -1.98
CDH11P55287 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.68□□□□□ -1.98
CDH11P55287 WASF1P1-201ENST00000447560 1131 ntBASIC2.68□□□□□ -1.98
CDH11P55287 AC092798.1-201ENST00000458542 409 ntBASIC2.68□□□□□ -1.98
CDH11P55287 RNU7-167P-201ENST00000459160 62 ntBASIC2.68□□□□□ -1.98
CDH11P55287 RNU6-1208P-201ENST00000459588 107 ntBASIC2.68□□□□□ -1.98
CDH11P55287 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.68□□□□□ -1.98
CDH11P55287 Y_RNA.665-201ENST00000516177 98 ntBASIC2.68□□□□□ -1.98
CDH11P55287 SNORA31.19-201ENST00000517079 126 ntBASIC2.68□□□□□ -1.98
CDH11P55287 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CDH11P55287 BNIP3P6-201ENST00000549284 499 ntBASIC2.68□□□□□ -1.98
CDH11P55287 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH11P55287 LARP7P3-201ENST00000579888 337 ntBASIC2.68□□□□□ -1.98
CDH11P55287 MIR5692A1-201ENST00000580523 69 ntBASIC2.68□□□□□ -1.98
CDH11P55287 NRBF2P5-201ENST00000603087 788 ntBASIC2.68□□□□□ -1.98
CDH11P55287 AL627309.6-201ENST00000606857 840 ntBASIC2.68□□□□□ -1.98
CDH11P55287 AC093732.2-201ENST00000607950 274 ntBASIC2.68□□□□□ -1.98
CDH11P55287 AC069234.5-201ENST00000611056 416 ntBASIC2.68□□□□□ -1.98
CDH11P55287 AL359198.2-201ENST00000611836 194 ntBASIC2.68□□□□□ -1.98
CDH11P55287 MIR622-201ENST00000638396 96 ntBASIC2.68□□□□□ -1.98
CDH11P55287 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.68□□□□□ -1.98
CDH11P55287 AC121333.1-201ENST00000567488 2709 ntBASIC2.68□□□□□ -1.98
CDH11P55287 AC004520.1-201ENST00000608362 1413 ntBASIC2.68□□□□□ -1.98
CDH11P55287 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CDH11P55287 AC233263.6-201ENST00000631132 1963 ntBASIC2.67□□□□□ -1.98
CDH11P55287 SNORD14B-201ENST00000364533 90 ntBASIC2.67□□□□□ -1.98
CDH11P55287 RNU6-7-201ENST00000364784 107 ntBASIC2.67□□□□□ -1.98
CDH11P55287 RNU6-1303P-201ENST00000364841 107 ntBASIC2.67□□□□□ -1.98
CDH11P55287 RNU6-8-201ENST00000365467 107 ntBASIC2.67□□□□□ -1.98
CDH11P55287 RNU6-1179P-201ENST00000384667 107 ntBASIC2.67□□□□□ -1.98
CDH11P55287 MIR518D-201ENST00000385014 87 ntBASIC2.67□□□□□ -1.98
CDH11P55287 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CDH11P55287 SNORD37.1-201ENST00000390968 65 ntBASIC2.67□□□□□ -1.98
CDH11P55287 RPL21P75-201ENST00000396599 483 ntBASIC2.67□□□□□ -1.98
CDH11P55287 RPL21P28-201ENST00000401418 483 ntBASIC2.67□□□□□ -1.98
CDH11P55287 Y_RNA.615-201ENST00000410769 117 ntBASIC2.67□□□□□ -1.98
CDH11P55287 RNU6-373P-201ENST00000411247 98 ntBASIC2.67□□□□□ -1.98
CDH11P55287 AC023141.4-201ENST00000412031 328 ntBASIC2.67□□□□□ -1.98
CDH11P55287 NDUFS5P4-201ENST00000412983 318 ntBASIC2.67□□□□□ -1.98
CDH11P55287 HMGN2P30-201ENST00000423237 256 ntBASIC2.67□□□□□ -1.98
CDH11P55287 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH11P55287 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH11P55287 AC098831.1-201ENST00000440661 216 ntBASIC2.67□□□□□ -1.98
CDH11P55287 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH11P55287 RPL21P39-201ENST00000463605 483 ntBASIC2.67□□□□□ -1.98
CDH11P55287 AC087190.1-201ENST00000484462 480 ntBASIC2.67□□□□□ -1.98
CDH11P55287 AC011005.2-201ENST00000487324 359 ntBASIC2.67□□□□□ -1.98
CDH11P55287 AC093591.1-201ENST00000491435 481 ntBASIC2.67□□□□□ -1.98
CDH11P55287 RPL21P16-201ENST00000495531 483 ntBASIC2.67□□□□□ -1.98
CDH11P55287 AC026801.1-201ENST00000497178 464 ntBASIC2.67□□□□□ -1.98
CDH11P55287 Y_RNA.654-201ENST00000497848 106 ntBASIC2.67□□□□□ -1.98
CDH11P55287 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH11P55287 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH11P55287 RNU6-1183P-201ENST00000517054 60 ntBASIC2.67□□□□□ -1.98
CDH11P55287 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH11P55287 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH11P55287 EIF4BP1-201ENST00000554881 351 ntBASIC2.67□□□□□ -1.98
CDH11P55287 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.67□□□□□ -1.98
CDH11P55287 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.67□□□□□ -1.98
CDH11P55287 HMGN2P15-201ENST00000585707 270 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms