Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.52□□□□□ -1.85
CLK3P49761 SDAD1P2-201ENST00000441308 2028 ntBASIC3.52□□□□□ -1.85
CLK3P49761 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLK3P49761 CEP170P1-201ENST00000502249 4587 ntBASIC3.52□□□□□ -1.85
CLK3P49761 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.52□□□□□ -1.85
CLK3P49761 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.52□□□□□ -1.85
CLK3P49761 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.52□□□□□ -1.85
CLK3P49761 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLK3P49761 AC233263.6-201ENST00000631132 1963 ntBASIC3.51□□□□□ -1.85
CLK3P49761 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLK3P49761 AC073073.2-201ENST00000609827 2578 ntBASIC3.51□□□□□ -1.85
CLK3P49761 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLK3P49761 RNU6-1062P-201ENST00000383908 107 ntBASIC3.51□□□□□ -1.85
CLK3P49761 Y_RNA.480-201ENST00000384364 102 ntBASIC3.51□□□□□ -1.85
CLK3P49761 RNU6-45P-201ENST00000384471 107 ntBASIC3.51□□□□□ -1.85
CLK3P49761 MIR1193-201ENST00000408109 78 ntBASIC3.51□□□□□ -1.85
CLK3P49761 MIR1290-201ENST00000408735 78 ntBASIC3.51□□□□□ -1.85
CLK3P49761 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.51□□□□□ -1.85
CLK3P49761 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.51□□□□□ -1.85
CLK3P49761 RPL21P2-201ENST00000440049 481 ntBASIC3.51□□□□□ -1.85
CLK3P49761 NEFMP1-201ENST00000443423 1006 ntBASIC3.51□□□□□ -1.85
CLK3P49761 SNORD127-201ENST00000458892 86 ntBASIC3.51□□□□□ -1.85
CLK3P49761 RNU7-138P-201ENST00000459479 64 ntBASIC3.51□□□□□ -1.85
CLK3P49761 PHBP14-201ENST00000512887 367 ntBASIC3.51□□□□□ -1.85
CLK3P49761 RNA5SP208-201ENST00000516156 78 ntBASIC3.51□□□□□ -1.85
CLK3P49761 SNORA70.16-201ENST00000516390 95 ntBASIC3.51□□□□□ -1.85
CLK3P49761 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.51□□□□□ -1.85
CLK3P49761 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.51□□□□□ -1.85
CLK3P49761 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.51□□□□□ -1.85
CLK3P49761 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.51□□□□□ -1.85
CLK3P49761 MIR5685-201ENST00000579080 79 ntBASIC3.51□□□□□ -1.85
CLK3P49761 AC067852.3-201ENST00000589177 561 ntBASIC3.51□□□□□ -1.85
CLK3P49761 AL512605.2-201ENST00000592972 256 ntBASIC3.51□□□□□ -1.85
CLK3P49761 AC078899.3-201ENST00000599065 212 ntBASIC3.51□□□□□ -1.85
CLK3P49761 AL020997.2-201ENST00000602607 184 ntBASIC3.51□□□□□ -1.85
CLK3P49761 AL137849.1-201ENST00000604767 169 ntBASIC3.51□□□□□ -1.85
CLK3P49761 MIR6798-201ENST00000612887 67 ntBASIC3.51□□□□□ -1.85
CLK3P49761 MIR8058-201ENST00000615737 89 ntBASIC3.51□□□□□ -1.85
CLK3P49761 MIR4272-201ENST00000635924 64 ntBASIC3.51□□□□□ -1.85
CLK3P49761 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.51□□□□□ -1.85
CLK3P49761 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.51□□□□□ -1.85
CLK3P49761 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CLK3P49761 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.51□□□□□ -1.85
CLK3P49761 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.51□□□□□ -1.85
CLK3P49761 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.51□□□□□ -1.85
CLK3P49761 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLK3P49761 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLK3P49761 Y_RNA.126-201ENST00000363382 111 ntBASIC3.5□□□□□ -1.85
CLK3P49761 Y_RNA.314-201ENST00000365114 102 ntBASIC3.5□□□□□ -1.85
CLK3P49761 MIR517A-201ENST00000385001 87 ntBASIC3.5□□□□□ -1.85
CLK3P49761 MIR1302-6-201ENST00000408466 90 ntBASIC3.5□□□□□ -1.85
CLK3P49761 SNORA57.3-201ENST00000411095 141 ntBASIC3.5□□□□□ -1.85
CLK3P49761 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.5□□□□□ -1.85
CLK3P49761 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLK3P49761 FTH1P25-201ENST00000447665 469 ntBASIC3.5□□□□□ -1.85
CLK3P49761 RNU7-187P-201ENST00000458985 68 ntBASIC3.5□□□□□ -1.85
CLK3P49761 RPL37P6-201ENST00000460682 294 ntBASIC3.5□□□□□ -1.85
CLK3P49761 AC011005.2-201ENST00000487324 359 ntBASIC3.5□□□□□ -1.85
CLK3P49761 RPL17P19-201ENST00000489069 552 ntBASIC3.5□□□□□ -1.85
CLK3P49761 AL049874.1-201ENST00000489560 388 ntBASIC3.5□□□□□ -1.85
CLK3P49761 AC093852.1-201ENST00000503587 266 ntBASIC3.5□□□□□ -1.85
CLK3P49761 Y_RNA.680-201ENST00000516441 93 ntBASIC3.5□□□□□ -1.85
CLK3P49761 RN7SKP60-201ENST00000516985 239 ntBASIC3.5□□□□□ -1.85
CLK3P49761 IGHV3-76-201ENST00000522465 295 ntBASIC3.5□□□□□ -1.85
CLK3P49761 AP000889.1-201ENST00000530968 660 ntBASIC3.5□□□□□ -1.85
CLK3P49761 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.5□□□□□ -1.85
CLK3P49761 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.5□□□□□ -1.85
CLK3P49761 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.5□□□□□ -1.85
CLK3P49761 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.5□□□□□ -1.85
CLK3P49761 AC109446.1-201ENST00000566172 220 ntBASIC3.5□□□□□ -1.85
CLK3P49761 AC005951.2-201ENST00000576282 495 ntBASIC3.5□□□□□ -1.85
CLK3P49761 AC012119.1-201ENST00000603184 222 ntBASIC3.5□□□□□ -1.85
CLK3P49761 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.5□□□□□ -1.85
CLK3P49761 AL672296.1-201ENST00000427780 2158 ntBASIC3.5□□□□□ -1.85
CLK3P49761 AC010615.1-201ENST00000594254 1764 ntBASIC3.5□□□□□ -1.85
CLK3P49761 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLK3P49761 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLK3P49761 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLK3P49761 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLK3P49761 AC008669.1-201ENST00000565823 2178 ntBASIC3.49□□□□□ -1.85
CLK3P49761 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLK3P49761 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLK3P49761 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLK3P49761 RNU6-596P-201ENST00000365395 98 ntBASIC3.49□□□□□ -1.85
CLK3P49761 RNU6-1329P-201ENST00000365664 107 ntBASIC3.49□□□□□ -1.85
CLK3P49761 Y_RNA.577-201ENST00000384794 101 ntBASIC3.49□□□□□ -1.85
CLK3P49761 MIR30B-201ENST00000384850 88 ntBASIC3.49□□□□□ -1.85
CLK3P49761 MIR514A1-201ENST00000385133 98 ntBASIC3.49□□□□□ -1.85
CLK3P49761 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CLK3P49761 AC092809.3-201ENST00000415453 231 ntBASIC3.49□□□□□ -1.85
CLK3P49761 SYF2P2-201ENST00000417620 583 ntBASIC3.49□□□□□ -1.85
CLK3P49761 AL160275.3-201ENST00000423876 471 ntBASIC3.49□□□□□ -1.85
CLK3P49761 AL356867.1-201ENST00000429623 299 ntBASIC3.49□□□□□ -1.85
CLK3P49761 RPS29P7-201ENST00000439662 171 ntBASIC3.49□□□□□ -1.85
CLK3P49761 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.49□□□□□ -1.85
CLK3P49761 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.49□□□□□ -1.85
CLK3P49761 HMGN2P16-201ENST00000456802 261 ntBASIC3.49□□□□□ -1.85
CLK3P49761 FTH1P2-201ENST00000466086 412 ntBASIC3.49□□□□□ -1.85
CLK3P49761 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.49□□□□□ -1.85
CLK3P49761 AC022447.4-201ENST00000504053 364 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms