Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.44□□□□□ -2.02
BRCC3P46736 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.44□□□□□ -2.02
BRCC3P46736 MIR1273D-201ENST00000577266 86 ntBASIC2.44□□□□□ -2.02
BRCC3P46736 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.44□□□□□ -2.02
BRCC3P46736 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.44□□□□□ -2.02
BRCC3P46736 AC008521.1-201ENST00000587471 187 ntBASIC2.44□□□□□ -2.02
BRCC3P46736 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.44□□□□□ -2.02
BRCC3P46736 AL355598.1-201ENST00000604169 202 ntBASIC2.44□□□□□ -2.02
BRCC3P46736 AC104237.2-201ENST00000612456 443 ntBASIC2.44□□□□□ -2.02
BRCC3P46736 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
BRCC3P46736 MIR6715A-201ENST00000615929 79 ntBASIC2.44□□□□□ -2.02
BRCC3P46736 UCA1.1-201ENST00000620952 75 ntBASIC2.44□□□□□ -2.02
BRCC3P46736 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.44□□□□□ -2.02
BRCC3P46736 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
BRCC3P46736 AC007336.1-201ENST00000576365 3828 ntBASIC2.44□□□□□ -2.02
BRCC3P46736 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
BRCC3P46736 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
BRCC3P46736 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.43□□□□□ -2.02
BRCC3P46736 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
BRCC3P46736 Y_RNA.409-201ENST00000383990 98 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 MIR221-201ENST00000385135 110 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 RNU6-750P-201ENST00000390946 107 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 UBE2V1P10-201ENST00000414685 269 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.43□□□□□ -2.02
BRCC3P46736 RPS15AP5-201ENST00000436276 388 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
BRCC3P46736 RPL37P6-201ENST00000460682 294 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 AC107626.1-201ENST00000471084 183 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 RPL39P36-201ENST00000490784 156 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 RPL9P6-201ENST00000492764 598 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 AC116562.3-201ENST00000506136 177 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
BRCC3P46736 SNORD27.1-201ENST00000516319 72 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 RNA5SP165-201ENST00000517142 115 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 RN7SKP40-201ENST00000517211 242 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.43□□□□□ -2.02
BRCC3P46736 AC068587.5-201ENST00000528506 175 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 MIR4775-201ENST00000581168 75 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.43□□□□□ -2.02
BRCC3P46736 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.43□□□□□ -2.02
BRCC3P46736 AC060766.3-201ENST00000591442 263 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 MTND4LP5-201ENST00000605152 292 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 MIR15A-201ENST00000607334 83 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 AC068792.1-201ENST00000621354 417 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 MIR6873-201ENST00000622788 63 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 AC009161.2-201ENST00000624626 138 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 OR5AK4P-201ENST00000635912 903 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 Z99571.1-201ENST00000636677 394 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.43□□□□□ -2.02
BRCC3P46736 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.43□□□□□ -2.02
BRCC3P46736 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.43□□□□□ -2.02
BRCC3P46736 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
BRCC3P46736 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
BRCC3P46736 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.42□□□□□ -2.02
BRCC3P46736 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
BRCC3P46736 SNORA62.1-201ENST00000364287 154 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 SNORD115-7-201ENST00000365306 82 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 RNU5A-6P-201ENST00000384136 116 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 Y_RNA.576-201ENST00000384781 102 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 CALM2P3-201ENST00000400429 449 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 AL591416.1-201ENST00000404015 867 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.42□□□□□ -2.02
BRCC3P46736 MTCO1P21-201ENST00000416634 589 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.42□□□□□ -2.02
BRCC3P46736 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.42□□□□□ -2.02
BRCC3P46736 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.42□□□□□ -2.02
BRCC3P46736 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
BRCC3P46736 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.42□□□□□ -2.02
BRCC3P46736 AL591212.2-201ENST00000433923 257 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 CR769767.1-201ENST00000436337 346 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 AC096638.1-201ENST00000444678 216 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.42□□□□□ -2.02
BRCC3P46736 FABP5P13-201ENST00000452144 328 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.42□□□□□ -2.02
BRCC3P46736 AL162395.1-201ENST00000457882 422 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 AC073901.1-201ENST00000462471 408 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.42□□□□□ -2.02
BRCC3P46736 RPS27P27-201ENST00000498779 255 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 AC117522.1-201ENST00000509821 380 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 RNU6-123P-201ENST00000516163 102 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 RNU6-914P-201ENST00000516749 109 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 RNU6-410P-201ENST00000517006 107 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.42□□□□□ -2.02
BRCC3P46736 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.42□□□□□ -2.02
BRCC3P46736 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.42□□□□□ -2.02
BRCC3P46736 OR5BN1P-201ENST00000532955 829 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.42□□□□□ -2.02
BRCC3P46736 GLYCAM1-201ENST00000546596 285 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 AC245505.1-201ENST00000556398 224 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 AF250324.2-201ENST00000608299 610 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 AC007684.1-201ENST00000609671 477 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 FO624990.1-201ENST00000636373 85 ntBASIC2.42□□□□□ -2.02
BRCC3P46736 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
BRCC3P46736 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
BRCC3P46736 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
BRCC3P46736 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
BRCC3P46736 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
BRCC3P46736 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
BRCC3P46736 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms