Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MTND4P2-201ENST00000507767 1203 ntBASIC1.99□□□□□ -2.09
RORAP35398 AF213884.2-201ENST00000510417 903 ntBASIC1.99□□□□□ -2.09
RORAP35398 SNORA3.4-201ENST00000515969 96 ntBASIC1.99□□□□□ -2.09
RORAP35398 RNU2-10P-201ENST00000516375 211 ntBASIC1.99□□□□□ -2.09
RORAP35398 RN7SKP287-201ENST00000516546 266 ntBASIC1.99□□□□□ -2.09
RORAP35398 SNORA31.19-201ENST00000517079 126 ntBASIC1.99□□□□□ -2.09
RORAP35398 RNU6-1315P-201ENST00000517187 99 ntBASIC1.99□□□□□ -2.09
RORAP35398 RNU2-19P-201ENST00000517288 84 ntBASIC1.99□□□□□ -2.09
RORAP35398 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.99□□□□□ -2.09
RORAP35398 CBX3P7-201ENST00000532876 502 ntBASIC1.99□□□□□ -2.09
RORAP35398 ZNF321P-202ENST00000550843 495 ntBASIC1.99□□□□□ -2.09
RORAP35398 HMGN1P30-201ENST00000589286 268 ntBASIC1.99□□□□□ -2.09
RORAP35398 AP002360.4-201ENST00000606980 481 ntBASIC1.99□□□□□ -2.09
RORAP35398 MIR15A-201ENST00000607334 83 ntBASIC1.99□□□□□ -2.09
RORAP35398 AC034229.4-201ENST00000607861 441 ntBASIC1.99□□□□□ -2.09
RORAP35398 U2.15-201ENST00000611544 191 ntBASIC1.99□□□□□ -2.09
RORAP35398 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.99□□□□□ -2.09
RORAP35398 U2.16-201ENST00000613119 191 ntBASIC1.99□□□□□ -2.09
RORAP35398 U2.12-201ENST00000613778 191 ntBASIC1.99□□□□□ -2.09
RORAP35398 U2.20-201ENST00000613956 192 ntBASIC1.99□□□□□ -2.09
RORAP35398 U2.9-201ENST00000615427 191 ntBASIC1.99□□□□□ -2.09
RORAP35398 U2.11-201ENST00000616345 191 ntBASIC1.99□□□□□ -2.09
RORAP35398 U2.2-201ENST00000616535 191 ntBASIC1.99□□□□□ -2.09
RORAP35398 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
RORAP35398 U2.3-201ENST00000617785 191 ntBASIC1.99□□□□□ -2.09
RORAP35398 U2.19-201ENST00000618602 191 ntBASIC1.99□□□□□ -2.09
RORAP35398 RNU2-1-201ENST00000618664 191 ntBASIC1.99□□□□□ -2.09
RORAP35398 U2.6-201ENST00000619225 191 ntBASIC1.99□□□□□ -2.09
RORAP35398 U2.5-201ENST00000619465 191 ntBASIC1.99□□□□□ -2.09
RORAP35398 AC024581.2-201ENST00000619986 252 ntBASIC1.99□□□□□ -2.09
RORAP35398 U2.10-201ENST00000620268 191 ntBASIC1.99□□□□□ -2.09
RORAP35398 AC244517.12-201ENST00000623581 663 ntBASIC1.99□□□□□ -2.09
RORAP35398 AC091932.3-201ENST00000624223 323 ntBASIC1.99□□□□□ -2.09
RORAP35398 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.99□□□□□ -2.09
RORAP35398 AC241585.2-209ENST00000638217 143 ntBASIC1.99□□□□□ -2.09
RORAP35398 TEX21P-201ENST00000447107 1476 ntBASIC1.99□□□□□ -2.09
RORAP35398 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.99□□□□□ -2.09
RORAP35398 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RORAP35398 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RORAP35398 RNU1-72P-201ENST00000362976 153 ntBASIC1.98□□□□□ -2.09
RORAP35398 RNU6-898P-201ENST00000365627 104 ntBASIC1.98□□□□□ -2.09
RORAP35398 RNU6-39P-201ENST00000384344 107 ntBASIC1.98□□□□□ -2.09
RORAP35398 RNU6-166P-201ENST00000384371 107 ntBASIC1.98□□□□□ -2.09
RORAP35398 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.98□□□□□ -2.09
RORAP35398 RPS15AP9-201ENST00000439856 381 ntBASIC1.98□□□□□ -2.09
RORAP35398 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.98□□□□□ -2.09
RORAP35398 AC093899.1-201ENST00000457984 376 ntBASIC1.98□□□□□ -2.09
RORAP35398 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.98□□□□□ -2.09
RORAP35398 snoU13.23-201ENST00000458863 104 ntBASIC1.98□□□□□ -2.09
RORAP35398 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.98□□□□□ -2.09
RORAP35398 AP000797.1-201ENST00000478870 387 ntBASIC1.98□□□□□ -2.09
RORAP35398 AC107032.1-201ENST00000485945 480 ntBASIC1.98□□□□□ -2.09
RORAP35398 AC011005.2-201ENST00000487324 359 ntBASIC1.98□□□□□ -2.09
RORAP35398 MTCYBP35-201ENST00000503630 1137 ntBASIC1.98□□□□□ -2.09
RORAP35398 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.98□□□□□ -2.09
RORAP35398 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.98□□□□□ -2.09
RORAP35398 AC011979.2-201ENST00000527568 352 ntBASIC1.98□□□□□ -2.09
RORAP35398 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.98□□□□□ -2.09
RORAP35398 AC012435.1-202ENST00000568772 240 ntBASIC1.98□□□□□ -2.09
RORAP35398 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RORAP35398 MIR4448-201ENST00000584360 86 ntBASIC1.98□□□□□ -2.09
RORAP35398 MIR5002-201ENST00000584713 97 ntBASIC1.98□□□□□ -2.09
RORAP35398 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.98□□□□□ -2.09
RORAP35398 AC025811.1-201ENST00000604312 472 ntBASIC1.98□□□□□ -2.09
RORAP35398 AL022161.1-201ENST00000604390 213 ntBASIC1.98□□□□□ -2.09
RORAP35398 AC093424.1-201ENST00000604999 338 ntBASIC1.98□□□□□ -2.09
RORAP35398 AC009318.2-201ENST00000610917 651 ntBASIC1.98□□□□□ -2.09
RORAP35398 AC023510.2-201ENST00000622162 746 ntBASIC1.98□□□□□ -2.09
RORAP35398 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
RORAP35398 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RORAP35398 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.97□□□□□ -2.09
RORAP35398 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
RORAP35398 RNU5E-1-201ENST00000362477 120 ntBASIC1.97□□□□□ -2.09
RORAP35398 RNU6-1280P-201ENST00000365211 107 ntBASIC1.97□□□□□ -2.09
RORAP35398 RNU6-190P-201ENST00000384154 102 ntBASIC1.97□□□□□ -2.09
RORAP35398 AL356583.2-201ENST00000426536 280 ntBASIC1.97□□□□□ -2.09
RORAP35398 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.97□□□□□ -2.09
RORAP35398 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.97□□□□□ -2.09
RORAP35398 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.97□□□□□ -2.09
RORAP35398 AL078601.1-201ENST00000444542 271 ntBASIC1.97□□□□□ -2.09
RORAP35398 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.97□□□□□ -2.09
RORAP35398 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.97□□□□□ -2.09
RORAP35398 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.97□□□□□ -2.09
RORAP35398 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.97□□□□□ -2.09
RORAP35398 AC023194.1-201ENST00000493084 308 ntBASIC1.97□□□□□ -2.09
RORAP35398 AC010587.1-201ENST00000505809 469 ntBASIC1.97□□□□□ -2.09
RORAP35398 AC116655.1-201ENST00000508324 901 ntBASIC1.97□□□□□ -2.09
RORAP35398 MRPS33P3-201ENST00000513456 322 ntBASIC1.97□□□□□ -2.09
RORAP35398 ACA59.2-201ENST00000517061 156 ntBASIC1.97□□□□□ -2.09
RORAP35398 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.97□□□□□ -2.09
RORAP35398 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.97□□□□□ -2.09
RORAP35398 AL157871.3-201ENST00000557231 293 ntBASIC1.97□□□□□ -2.09
RORAP35398 MIR4524B-201ENST00000581569 115 ntBASIC1.97□□□□□ -2.09
RORAP35398 WISP1-OT1-201ENST00000602893 642 ntBASIC1.97□□□□□ -2.09
RORAP35398 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.97□□□□□ -2.09
RORAP35398 uc_338.20-201ENST00000621563 178 ntBASIC1.97□□□□□ -2.09
RORAP35398 AC131159.1-201ENST00000621854 213 ntBASIC1.97□□□□□ -2.09
RORAP35398 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.97□□□□□ -2.09
RORAP35398 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.97□□□□□ -2.09
RORAP35398 CENPCP1-201ENST00000533085 2578 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms