Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.83□□□□□ -1.96
BDNFP23560 IPO7P1-201ENST00000442031 636 ntBASIC2.83□□□□□ -1.96
BDNFP23560 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.83□□□□□ -1.96
BDNFP23560 GAPDHP17-201ENST00000449858 1001 ntBASIC2.83□□□□□ -1.96
BDNFP23560 RNU7-182P-201ENST00000459009 62 ntBASIC2.83□□□□□ -1.96
BDNFP23560 AC010486.2-201ENST00000505572 483 ntBASIC2.83□□□□□ -1.96
BDNFP23560 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.83□□□□□ -1.96
BDNFP23560 AC104136.1-201ENST00000512969 394 ntBASIC2.83□□□□□ -1.96
BDNFP23560 RNU2-53P-201ENST00000516257 147 ntBASIC2.83□□□□□ -1.96
BDNFP23560 Y_RNA.687-201ENST00000516558 91 ntBASIC2.83□□□□□ -1.96
BDNFP23560 RNU6-586P-201ENST00000517265 104 ntBASIC2.83□□□□□ -1.96
BDNFP23560 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.83□□□□□ -1.96
BDNFP23560 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.83□□□□□ -1.96
BDNFP23560 MYL12BP1-201ENST00000569826 507 ntBASIC2.83□□□□□ -1.96
BDNFP23560 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.83□□□□□ -1.96
BDNFP23560 AL121917.1-203ENST00000605534 577 ntBASIC2.83□□□□□ -1.96
BDNFP23560 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.83□□□□□ -1.96
BDNFP23560 AP001486.3-201ENST00000615334 372 ntBASIC2.83□□□□□ -1.96
BDNFP23560 AC012640.5-201ENST00000623897 319 ntBASIC2.83□□□□□ -1.96
BDNFP23560 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.83□□□□□ -1.96
BDNFP23560 SEPT14P19-203ENST00000633205 211 ntBASIC2.83□□□□□ -1.96
BDNFP23560 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.83□□□□□ -1.96
BDNFP23560 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.83□□□□□ -1.96
BDNFP23560 AC002543.1-201ENST00000299783 1954 ntBASIC2.82□□□□□ -1.96
BDNFP23560 Y_RNA.169-201ENST00000363745 96 ntBASIC2.82□□□□□ -1.96
BDNFP23560 RNU6-371P-201ENST00000364283 108 ntBASIC2.82□□□□□ -1.96
BDNFP23560 Y_RNA.576-201ENST00000384781 102 ntBASIC2.82□□□□□ -1.96
BDNFP23560 MIR186-201ENST00000384988 86 ntBASIC2.82□□□□□ -1.96
BDNFP23560 SNORA40.19-201ENST00000390846 128 ntBASIC2.82□□□□□ -1.96
BDNFP23560 AL590004.2-201ENST00000404787 371 ntBASIC2.82□□□□□ -1.96
BDNFP23560 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.82□□□□□ -1.96
BDNFP23560 OR9R1P-201ENST00000412200 877 ntBASIC2.82□□□□□ -1.96
BDNFP23560 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.82□□□□□ -1.96
BDNFP23560 CALM1P1-201ENST00000442082 433 ntBASIC2.82□□□□□ -1.96
BDNFP23560 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.82□□□□□ -1.96
BDNFP23560 AC008571.1-201ENST00000467232 300 ntBASIC2.82□□□□□ -1.96
BDNFP23560 OR5AL2P-201ENST00000532185 920 ntBASIC2.82□□□□□ -1.96
BDNFP23560 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.82□□□□□ -1.96
BDNFP23560 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.82□□□□□ -1.96
BDNFP23560 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.82□□□□□ -1.96
BDNFP23560 AL713866.2-201ENST00000603579 219 ntBASIC2.82□□□□□ -1.96
BDNFP23560 AC098614.4-201ENST00000607601 462 ntBASIC2.82□□□□□ -1.96
BDNFP23560 AC006566.1-201ENST00000608943 513 ntBASIC2.82□□□□□ -1.96
BDNFP23560 RMST_4.1-201ENST00000616886 107 ntBASIC2.82□□□□□ -1.96
BDNFP23560 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.82□□□□□ -1.96
BDNFP23560 AL359740.1-201ENST00000624340 592 ntBASIC2.82□□□□□ -1.96
BDNFP23560 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
BDNFP23560 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
BDNFP23560 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
BDNFP23560 RNU6-655P-201ENST00000362858 107 ntBASIC2.81□□□□□ -1.96
BDNFP23560 RNU1-72P-201ENST00000362976 153 ntBASIC2.81□□□□□ -1.96
BDNFP23560 SNORD115-7-201ENST00000365306 82 ntBASIC2.81□□□□□ -1.96
BDNFP23560 MIR454-201ENST00000390180 115 ntBASIC2.81□□□□□ -1.96
BDNFP23560 RPS4XP8-201ENST00000402039 771 ntBASIC2.81□□□□□ -1.96
BDNFP23560 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.81□□□□□ -1.96
BDNFP23560 EEF1A1P40-201ENST00000412883 573 ntBASIC2.81□□□□□ -1.96
BDNFP23560 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.81□□□□□ -1.96
BDNFP23560 MTND3P17-201ENST00000416968 344 ntBASIC2.81□□□□□ -1.96
BDNFP23560 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.81□□□□□ -1.96
BDNFP23560 AC096725.1-201ENST00000514266 313 ntBASIC2.81□□□□□ -1.96
BDNFP23560 SNORA18.6-201ENST00000516792 115 ntBASIC2.81□□□□□ -1.96
BDNFP23560 AC121758.2-201ENST00000553271 193 ntBASIC2.81□□□□□ -1.96
BDNFP23560 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.81□□□□□ -1.96
BDNFP23560 AC109446.2-201ENST00000567872 497 ntBASIC2.81□□□□□ -1.96
BDNFP23560 AC026271.5-201ENST00000577873 130 ntBASIC2.81□□□□□ -1.96
BDNFP23560 MIR4529-201ENST00000578110 78 ntBASIC2.81□□□□□ -1.96
BDNFP23560 AC093648.1-201ENST00000623546 606 ntBASIC2.81□□□□□ -1.96
BDNFP23560 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
BDNFP23560 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
BDNFP23560 RNU6-622P-201ENST00000384272 103 ntBASIC2.8□□□□□ -1.96
BDNFP23560 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.8□□□□□ -1.96
BDNFP23560 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.8□□□□□ -1.96
BDNFP23560 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.8□□□□□ -1.96
BDNFP23560 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.8□□□□□ -1.96
BDNFP23560 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.8□□□□□ -1.96
BDNFP23560 AL360271.2-201ENST00000447710 161 ntBASIC2.8□□□□□ -1.96
BDNFP23560 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.8□□□□□ -1.96
BDNFP23560 MTND1P27-201ENST00000451117 902 ntBASIC2.8□□□□□ -1.96
BDNFP23560 GSTA11P-201ENST00000452866 669 ntBASIC2.8□□□□□ -1.96
BDNFP23560 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.8□□□□□ -1.96
BDNFP23560 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.8□□□□□ -1.96
BDNFP23560 RPL23AP94-201ENST00000512518 302 ntBASIC2.8□□□□□ -1.96
BDNFP23560 SNORA43.2-201ENST00000516652 128 ntBASIC2.8□□□□□ -1.96
BDNFP23560 RNU6-826P-201ENST00000516827 104 ntBASIC2.8□□□□□ -1.96
BDNFP23560 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
BDNFP23560 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.8□□□□□ -1.96
BDNFP23560 MIR4635-201ENST00000583759 79 ntBASIC2.8□□□□□ -1.96
BDNFP23560 SEPT7P9-203ENST00000604116 343 ntBASIC2.8□□□□□ -1.96
BDNFP23560 Z94722.1-201ENST00000604328 474 ntBASIC2.8□□□□□ -1.96
BDNFP23560 AC109347.2-201ENST00000610220 349 ntBASIC2.8□□□□□ -1.96
BDNFP23560 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
BDNFP23560 AC072046.2-201ENST00000618366 268 ntBASIC2.8□□□□□ -1.96
BDNFP23560 AC092608.2-201ENST00000624427 218 ntBASIC2.8□□□□□ -1.96
BDNFP23560 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
BDNFP23560 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
BDNFP23560 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.8□□□□□ -1.96
BDNFP23560 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
BDNFP23560 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.79□□□□□ -1.96
BDNFP23560 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
BDNFP23560 Y_RNA.367-201ENST00000365544 101 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms