| PTPN2 | P17706 | AL512791.1-201 | ENST00000555853 | 300 nt | TSL 3 BASIC | 3.11 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | MIR5692A1-201 | ENST00000580523 | 69 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | MTND4LP5-201 | ENST00000605152 | 292 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AL512625.3-207 | ENST00000609749 | 477 nt | TSL 3 BASIC | 3.11 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | C8orf59-208 | ENST00000612809 | 475 nt | APPRIS P1 TSL 1 (best) BASIC | 3.11 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | DUSP12P1-201 | ENST00000612874 | 516 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | OR4C16-201 | ENST00000623907 | 933 nt | APPRIS P1 BASIC | 3.11 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC110079.1-202 | ENST00000635213 | 138 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | PRKACB-217 | ENST00000610457 | 4206 nt | TSL 2 BASIC | 3.11 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | PRKACB-218 | ENST00000610703 | 4240 nt | TSL 2 BASIC | 3.11 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AL359693.1-201 | ENST00000614959 | 2407 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | TANK-201 | ENST00000259075 | 2152 nt | APPRIS P1 TSL 1 (best) BASIC | 3.11 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC004520.1-201 | ENST00000608362 | 1413 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | CBLL1-201 | ENST00000222597 | 2003 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | NEB-220 | ENST00000618972 | 26307 nt | APPRIS ALT2 TSL 5 BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC010680.1-201 | ENST00000590024 | 3590 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | N4BP2L2-211 | ENST00000504114 | 2513 nt | TSL 5 BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC073325.2-201 | ENST00000339545 | 159 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | RNU6-395P-201 | ENST00000365662 | 106 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | OR51A4-201 | ENST00000380373 | 1002 nt | APPRIS P1 BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | SNORD21-201 | ENST00000383953 | 95 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | SNORA75B-201 | ENST00000384053 | 137 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | RNU6-45P-201 | ENST00000384471 | 107 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | SNORA16.2-201 | ENST00000390991 | 127 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | RNU6-332P-201 | ENST00000391193 | 108 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AL669831.1-202 | ENST00000428504 | 417 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AL451060.1-203 | ENST00000431307 | 362 nt | TSL 3 BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AL136234.1-201 | ENST00000437080 | 349 nt | TSL 2 BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | HMGB1P31-201 | ENST00000437242 | 427 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | GTF2IP13-201 | ENST00000438487 | 386 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC105272.1-201 | ENST00000438604 | 198 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | CALM1P1-201 | ENST00000442082 | 433 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | RPS12P18-201 | ENST00000442381 | 270 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AL360271.2-201 | ENST00000447710 | 161 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | RN7SL75P-201 | ENST00000461926 | 281 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | HIGD1AP13-201 | ENST00000509878 | 289 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC112206.3-201 | ENST00000514578 | 389 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC068880.3-201 | ENST00000519185 | 179 nt | TSL 5 BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC009902.1-201 | ENST00000519351 | 183 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC025871.1-201 | ENST00000523935 | 443 nt | TSL 2 BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AL118558.2-201 | ENST00000556294 | 238 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | LINC02328-203 | ENST00000557195 | 682 nt | TSL 3 BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | MIR3162-201 | ENST00000581818 | 82 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC016866.2-201 | ENST00000585251 | 502 nt | TSL 2 BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC010722.1-201 | ENST00000622595 | 582 nt | TSL 5 BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC002064.3-201 | ENST00000623448 | 346 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AP003400.5-201 | ENST00000624827 | 617 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | CEP57L1-216 | ENST00000521522 | 2259 nt | TSL 5 BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC096644.4-201 | ENST00000563417 | 2912 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | FAM214A-201 | ENST00000261844 | 4217 nt | APPRIS P1 TSL 1 (best) BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AF165147.1-201 | ENST00000433310 | 6103 nt | TSL 2 BASIC | 3.1 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | MGAT4C-211 | ENST00000621808 | 2582 nt | APPRIS P1 TSL 1 (best) BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AL445259.1-201 | ENST00000587106 | 2984 nt | TSL 5 BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | ROCK2-203 | ENST00000401753 | 4017 nt | TSL 1 (best) BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | DEFB107A-201 | ENST00000335021 | 389 nt | APPRIS P1 TSL 1 (best) BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | DEFB107B-201 | ENST00000355602 | 389 nt | APPRIS P1 TSL 1 (best) BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | U3.6-201 | ENST00000363622 | 211 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | Y_RNA.231-201 | ENST00000364358 | 102 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | MIR767-201 | ENST00000390228 | 109 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AL592114.1-201 | ENST00000403842 | 483 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC062039.1-201 | ENST00000414394 | 565 nt | TSL 2 BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC005062.1-207 | ENST00000418442 | 587 nt | TSL 3 BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | RPL30P16-201 | ENST00000419341 | 429 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | HMGN2P30-201 | ENST00000423237 | 256 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AL500522.1-201 | ENST00000423667 | 318 nt | TSL 3 BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC007560.1-201 | ENST00000426912 | 237 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AL592466.1-201 | ENST00000428346 | 307 nt | TSL 5 BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | TRAPPC2P3-201 | ENST00000443200 | 321 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | WASF1P1-201 | ENST00000447560 | 1131 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AL139260.1-202 | ENST00000456813 | 441 nt | TSL 3 BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | RNU7-23P-201 | ENST00000459465 | 62 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | RPL23AP11-201 | ENST00000475260 | 469 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | LINC00971-201 | ENST00000482721 | 535 nt | TSL 2 BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | RN7SL20P-201 | ENST00000488827 | 297 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | RPS29P20-201 | ENST00000489592 | 171 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC106892.1-201 | ENST00000491608 | 406 nt | TSL 3 BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | MTCYBP18-201 | ENST00000501056 | 747 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | PRDX4P1-201 | ENST00000507189 | 574 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | MTND3P25-201 | ENST00000509243 | 135 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC097375.2-201 | ENST00000510416 | 579 nt | TSL 5 BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | LRRC34P2-201 | ENST00000514850 | 553 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | RN7SKP132-201 | ENST00000516001 | 208 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | RNU6-358P-201 | ENST00000516564 | 75 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | MAPK1-204 | ENST00000544786 | 951 nt | TSL 1 (best) BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC090607.4-201 | ENST00000558192 | 369 nt | TSL 3 BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC008739.2-201 | ENST00000597006 | 317 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC073539.2-201 | ENST00000597113 | 165 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC012119.1-201 | ENST00000603184 | 222 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AL035413.2-201 | ENST00000604801 | 525 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | RNU6-89P-201 | ENST00000606519 | 100 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | SMAD5-AS1_1.1-201 | ENST00000619886 | 266 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC007318.2-201 | ENST00000620999 | 243 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC244517.5-202 | ENST00000623741 | 500 nt | TSL 3 BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | PROX1-AS1-244 | ENST00000630355 | 599 nt | TSL 5 BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | U6.99-201 | ENST00000637524 | 83 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | AC100810.6-201 | ENST00000638068 | 285 nt | BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | TRDN-201 | ENST00000334268 | 4770 nt | APPRIS P3 TSL 1 (best) BASIC | 3.09 | □□□□□ -1.91 | | |
| PTPN2 | P17706 | CDC27-207 | ENST00000531206 | 3177 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.09 | □□□□□ -1.92 | | |
| PTPN2 | P17706 | AC004944.1-201 | ENST00000517807 | 3059 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| PTPN2 | P17706 | PIK3C2G-206 | ENST00000538779 | 4963 nt | TSL 5 BASIC | 3.08 | □□□□□ -1.92 | | |