Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL161788.1-201ENST00000441805 169 ntBASIC0.23□□□□□ -2.37
HMGA1P17096 AC245102.2-201ENST00000448956 180 ntBASIC0.23□□□□□ -2.37
HMGA1P17096 AC105313.1-201ENST00000509121 353 ntBASIC0.23□□□□□ -2.37
HMGA1P17096 SNORA31.17-201ENST00000516953 127 ntBASIC0.23□□□□□ -2.37
HMGA1P17096 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.23□□□□□ -2.37
HMGA1P17096 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.23□□□□□ -2.37
HMGA1P17096 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.23□□□□□ -2.37
HMGA1P17096 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.23□□□□□ -2.37
HMGA1P17096 BNIP3P27-201ENST00000599991 412 ntBASIC0.23□□□□□ -2.37
HMGA1P17096 MIR6718-201ENST00000616153 80 ntBASIC0.23□□□□□ -2.37
HMGA1P17096 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.23□□□□□ -2.37
HMGA1P17096 ZNF663P-202ENST00000641770 1131 ntBASIC0.23□□□□□ -2.37
HMGA1P17096 AC100821.1-201ENST00000523153 2479 ntBASIC0.22□□□□□ -2.37
HMGA1P17096 RNU4-12P-201ENST00000365233 139 ntBASIC0.22□□□□□ -2.37
HMGA1P17096 AC132479.1-201ENST00000449160 144 ntBASIC0.22□□□□□ -2.37
HMGA1P17096 COX6CP6-201ENST00000490840 228 ntBASIC0.22□□□□□ -2.37
HMGA1P17096 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.22□□□□□ -2.37
HMGA1P17096 PDCD5P2-201ENST00000507570 312 ntBASIC0.22□□□□□ -2.37
HMGA1P17096 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.22□□□□□ -2.37
HMGA1P17096 OR5AK1P-201ENST00000524837 922 ntBASIC0.22□□□□□ -2.37
HMGA1P17096 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.22□□□□□ -2.37
HMGA1P17096 AC006199.1-201ENST00000548728 219 ntBASIC0.22□□□□□ -2.37
HMGA1P17096 BBIP1P1-201ENST00000602999 279 ntBASIC0.22□□□□□ -2.37
HMGA1P17096 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
HMGA1P17096 AL359314.1-201ENST00000616913 261 ntBASIC0.22□□□□□ -2.37
HMGA1P17096 MIR2909-201ENST00000617113 69 ntBASIC0.22□□□□□ -2.37
HMGA1P17096 RNU6-414P-201ENST00000363705 104 ntBASIC0.21□□□□□ -2.38
HMGA1P17096 RNA5SP100-201ENST00000410903 110 ntBASIC0.21□□□□□ -2.38
HMGA1P17096 RNA5SP59-201ENST00000410922 110 ntBASIC0.21□□□□□ -2.38
HMGA1P17096 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.21□□□□□ -2.38
HMGA1P17096 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.21□□□□□ -2.38
HMGA1P17096 AP1S2P1-201ENST00000457344 379 ntBASIC0.21□□□□□ -2.38
HMGA1P17096 RPS20P24-201ENST00000457473 361 ntBASIC0.21□□□□□ -2.38
HMGA1P17096 MTND1P16-201ENST00000465177 898 ntBASIC0.21□□□□□ -2.38
HMGA1P17096 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
HMGA1P17096 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.21□□□□□ -2.38
HMGA1P17096 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.21□□□□□ -2.38
HMGA1P17096 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.21□□□□□ -2.38
HMGA1P17096 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.21□□□□□ -2.38
HMGA1P17096 AL049870.4-201ENST00000555741 486 ntBASIC0.21□□□□□ -2.38
HMGA1P17096 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.21□□□□□ -2.38
HMGA1P17096 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.21□□□□□ -2.38
HMGA1P17096 AC112220.3-201ENST00000605502 502 ntBASIC0.21□□□□□ -2.38
HMGA1P17096 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.21□□□□□ -2.38
HMGA1P17096 uc_338.14-201ENST00000613162 166 ntBASIC0.21□□□□□ -2.38
HMGA1P17096 AL109933.3-201ENST00000619095 188 ntBASIC0.21□□□□□ -2.38
HMGA1P17096 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.21□□□□□ -2.38
HMGA1P17096 AC009033.1-201ENST00000624279 431 ntBASIC0.21□□□□□ -2.38
HMGA1P17096 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.2□□□□□ -2.38
HMGA1P17096 RNU4-67P-201ENST00000364569 141 ntBASIC0.2□□□□□ -2.38
HMGA1P17096 RNU6-716P-201ENST00000365621 103 ntBASIC0.2□□□□□ -2.38
HMGA1P17096 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
HMGA1P17096 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.2□□□□□ -2.38
HMGA1P17096 KATNBL1P6-201ENST00000453433 915 ntBASIC0.2□□□□□ -2.38
HMGA1P17096 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.2□□□□□ -2.38
HMGA1P17096 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.2□□□□□ -2.38
HMGA1P17096 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.2□□□□□ -2.38
HMGA1P17096 AC090142.3-201ENST00000519012 385 ntBASIC0.2□□□□□ -2.38
HMGA1P17096 CYCSP23-201ENST00000519781 313 ntBASIC0.2□□□□□ -2.38
HMGA1P17096 AL590705.4-201ENST00000532209 134 ntBASIC0.2□□□□□ -2.38
HMGA1P17096 AC022616.8-201ENST00000533569 253 ntBASIC0.2□□□□□ -2.38
HMGA1P17096 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.2□□□□□ -2.38
HMGA1P17096 MIR6516-201ENST00000630554 81 ntBASIC0.2□□□□□ -2.38
HMGA1P17096 MIR302D-201ENST00000362275 68 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 RNA5SP361-201ENST00000362686 118 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 RNU6-98P-201ENST00000384173 107 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 RNU6-348P-201ENST00000384386 107 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 RNU6-1065P-201ENST00000384513 106 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 BTF3P8-201ENST00000414577 526 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.19□□□□□ -2.38
HMGA1P17096 SNORD124-201ENST00000459577 104 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 RPL22P13-201ENST00000493291 347 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.19□□□□□ -2.38
HMGA1P17096 RNU5A-7P-201ENST00000515979 116 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 RNU6-202P-201ENST00000515998 96 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 RNU6-1256P-201ENST00000516539 103 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 RNU4-77P-201ENST00000516692 156 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 AP001893.2-201ENST00000526949 202 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 CYCSP27-201ENST00000527643 293 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.19□□□□□ -2.38
HMGA1P17096 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.19□□□□□ -2.38
HMGA1P17096 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 AC005021.1-201ENST00000608730 355 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.19□□□□□ -2.38
HMGA1P17096 AC092125.1-201ENST00000562568 1995 ntBASIC0.19□□□□□ -2.38
HMGA1P17096 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
HMGA1P17096 RNU6-884P-201ENST00000363889 107 ntBASIC0.18□□□□□ -2.38
HMGA1P17096 RNU6-945P-201ENST00000383947 107 ntBASIC0.18□□□□□ -2.38
HMGA1P17096 MIR95-201ENST00000385072 81 ntBASIC0.18□□□□□ -2.38
HMGA1P17096 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.18□□□□□ -2.38
HMGA1P17096 NCOR1P3-201ENST00000420479 303 ntBASIC0.18□□□□□ -2.38
HMGA1P17096 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.18□□□□□ -2.38
HMGA1P17096 AL049874.1-201ENST00000489560 388 ntBASIC0.18□□□□□ -2.38
HMGA1P17096 RNVU1-2-201ENST00000516326 135 ntBASIC0.18□□□□□ -2.38
HMGA1P17096 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.18□□□□□ -2.38
HMGA1P17096 AL161729.4-201ENST00000604650 476 ntBASIC0.18□□□□□ -2.38
HMGA1P17096 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
HMGA1P17096 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms