Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 LRRC37A5P-203ENST00000580181 585 ntBASIC3□□□□□ -1.93
PCNAP12004 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3□□□□□ -1.93
PCNAP12004 AC020895.1-201ENST00000595362 272 ntBASIC3□□□□□ -1.93
PCNAP12004 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
PCNAP12004 MIR6075-201ENST00000620782 95 ntBASIC3□□□□□ -1.93
PCNAP12004 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3□□□□□ -1.93
PCNAP12004 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
PCNAP12004 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PCNAP12004 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.99□□□□□ -1.93
PCNAP12004 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCNAP12004 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PCNAP12004 Y_RNA.88-201ENST00000363029 99 ntBASIC2.99□□□□□ -1.93
PCNAP12004 RNU6-266P-201ENST00000364225 107 ntBASIC2.99□□□□□ -1.93
PCNAP12004 RNA5SP267-201ENST00000364893 126 ntBASIC2.99□□□□□ -1.93
PCNAP12004 RNU6-898P-201ENST00000365627 104 ntBASIC2.99□□□□□ -1.93
PCNAP12004 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.99□□□□□ -1.93
PCNAP12004 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PCNAP12004 SNORD15B-201ENST00000384714 146 ntBASIC2.99□□□□□ -1.93
PCNAP12004 SNORD67-201ENST00000390833 111 ntBASIC2.99□□□□□ -1.93
PCNAP12004 RPL26P27-201ENST00000414397 437 ntBASIC2.99□□□□□ -1.93
PCNAP12004 AC138393.2-201ENST00000414742 246 ntBASIC2.99□□□□□ -1.93
PCNAP12004 RPLP0P7-201ENST00000416050 667 ntBASIC2.99□□□□□ -1.93
PCNAP12004 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.99□□□□□ -1.93
PCNAP12004 AC016831.2-201ENST00000417179 352 ntBASIC2.99□□□□□ -1.93
PCNAP12004 RPL37P4-201ENST00000448908 268 ntBASIC2.99□□□□□ -1.93
PCNAP12004 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.99□□□□□ -1.93
PCNAP12004 RPL7P49-201ENST00000471402 708 ntBASIC2.99□□□□□ -1.93
PCNAP12004 AC011005.2-201ENST00000487324 359 ntBASIC2.99□□□□□ -1.93
PCNAP12004 HIGD1AP13-201ENST00000509878 289 ntBASIC2.99□□□□□ -1.93
PCNAP12004 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.99□□□□□ -1.93
PCNAP12004 MIR892C-201ENST00000516410 77 ntBASIC2.99□□□□□ -1.93
PCNAP12004 RNU6-1314P-201ENST00000517139 104 ntBASIC2.99□□□□□ -1.93
PCNAP12004 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.99□□□□□ -1.93
PCNAP12004 AP000763.2-201ENST00000540641 163 ntBASIC2.99□□□□□ -1.93
PCNAP12004 MIR4782-201ENST00000577987 79 ntBASIC2.99□□□□□ -1.93
PCNAP12004 MIR4444-1-201ENST00000581696 74 ntBASIC2.99□□□□□ -1.93
PCNAP12004 UBL5P2-201ENST00000583788 219 ntBASIC2.99□□□□□ -1.93
PCNAP12004 MIR4444-2-201ENST00000584390 74 ntBASIC2.99□□□□□ -1.93
PCNAP12004 AC018638.8-201ENST00000588755 281 ntBASIC2.99□□□□□ -1.93
PCNAP12004 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.99□□□□□ -1.93
PCNAP12004 Z82243.1-201ENST00000609432 473 ntBASIC2.99□□□□□ -1.93
PCNAP12004 AC069234.5-201ENST00000611056 416 ntBASIC2.99□□□□□ -1.93
PCNAP12004 AC018692.3-201ENST00000623929 123 ntBASIC2.99□□□□□ -1.93
PCNAP12004 ZNF519P1-201ENST00000449011 1626 ntBASIC2.99□□□□□ -1.93
PCNAP12004 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.99□□□□□ -1.93
PCNAP12004 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PCNAP12004 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PCNAP12004 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PCNAP12004 RNU1-109P-201ENST00000383960 147 ntBASIC2.98□□□□□ -1.93
PCNAP12004 RNA5SP120-201ENST00000410900 112 ntBASIC2.98□□□□□ -1.93
PCNAP12004 RPL19P1-201ENST00000411635 428 ntBASIC2.98□□□□□ -1.93
PCNAP12004 AC023141.4-201ENST00000412031 328 ntBASIC2.98□□□□□ -1.93
PCNAP12004 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.98□□□□□ -1.93
PCNAP12004 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.98□□□□□ -1.93
PCNAP12004 BPY2DP-201ENST00000422208 265 ntBASIC2.98□□□□□ -1.93
PCNAP12004 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.98□□□□□ -1.93
PCNAP12004 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.98□□□□□ -1.93
PCNAP12004 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.98□□□□□ -1.93
PCNAP12004 UBBP3-201ENST00000445497 241 ntBASIC2.98□□□□□ -1.93
PCNAP12004 AL358232.1-201ENST00000448030 501 ntBASIC2.98□□□□□ -1.93
PCNAP12004 MTATP6P7-201ENST00000453315 681 ntBASIC2.98□□□□□ -1.93
PCNAP12004 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.98□□□□□ -1.93
PCNAP12004 AC007547.1-201ENST00000462177 490 ntBASIC2.98□□□□□ -1.93
PCNAP12004 RN7SL499P-201ENST00000481141 276 ntBASIC2.98□□□□□ -1.93
PCNAP12004 SNORA25.17-201ENST00000517184 124 ntBASIC2.98□□□□□ -1.93
PCNAP12004 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.98□□□□□ -1.93
PCNAP12004 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.98□□□□□ -1.93
PCNAP12004 AL355598.1-201ENST00000604169 202 ntBASIC2.98□□□□□ -1.93
PCNAP12004 AC123912.5-201ENST00000605470 343 ntBASIC2.98□□□□□ -1.93
PCNAP12004 MIR7112-201ENST00000616126 65 ntBASIC2.98□□□□□ -1.93
PCNAP12004 AC103705.1-201ENST00000619013 241 ntBASIC2.98□□□□□ -1.93
PCNAP12004 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.98□□□□□ -1.93
PCNAP12004 AC005858.4-201ENST00000623191 700 ntBASIC2.98□□□□□ -1.93
PCNAP12004 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PCNAP12004 AC138393.1-203ENST00000327086 343 ntBASIC2.97□□□□□ -1.93
PCNAP12004 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.97□□□□□ -1.93
PCNAP12004 RNU6-82P-201ENST00000363970 107 ntBASIC2.97□□□□□ -1.93
PCNAP12004 FO393413.1-201ENST00000402892 195 ntBASIC2.97□□□□□ -1.93
PCNAP12004 RNU2-25P-201ENST00000411041 191 ntBASIC2.97□□□□□ -1.93
PCNAP12004 NDUFS5P4-201ENST00000412983 318 ntBASIC2.97□□□□□ -1.93
PCNAP12004 AL513185.2-201ENST00000425543 193 ntBASIC2.97□□□□□ -1.93
PCNAP12004 AL627311.1-201ENST00000431514 115 ntBASIC2.97□□□□□ -1.93
PCNAP12004 MTCO3P18-201ENST00000440206 761 ntBASIC2.97□□□□□ -1.93
PCNAP12004 AC098831.1-201ENST00000440661 216 ntBASIC2.97□□□□□ -1.93
PCNAP12004 RPS12P18-201ENST00000442381 270 ntBASIC2.97□□□□□ -1.93
PCNAP12004 RNU7-66P-201ENST00000459469 62 ntBASIC2.97□□□□□ -1.93
PCNAP12004 HMGB1P30-201ENST00000492455 606 ntBASIC2.97□□□□□ -1.93
PCNAP12004 AC114786.4-201ENST00000508771 728 ntBASIC2.97□□□□□ -1.93
PCNAP12004 AC098799.2-201ENST00000509466 868 ntBASIC2.97□□□□□ -1.93
PCNAP12004 FAM206BP-201ENST00000510179 541 ntBASIC2.97□□□□□ -1.93
PCNAP12004 SNORA14.1-201ENST00000516113 141 ntBASIC2.97□□□□□ -1.93
PCNAP12004 SNORA20.3-201ENST00000516880 132 ntBASIC2.97□□□□□ -1.93
PCNAP12004 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PCNAP12004 AC118273.2-201ENST00000532092 465 ntBASIC2.97□□□□□ -1.93
PCNAP12004 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.97□□□□□ -1.93
PCNAP12004 AL121579.1-201ENST00000555129 305 ntBASIC2.97□□□□□ -1.93
PCNAP12004 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.97□□□□□ -1.93
PCNAP12004 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.97□□□□□ -1.93
PCNAP12004 AL451007.1-201ENST00000595491 289 ntBASIC2.97□□□□□ -1.93
PCNAP12004 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms