Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SNORD114-31-201ENST00000363219 75 ntBASIC-0.15□□□□□ -2.43
TOP2AP11388 RNA5SP331-201ENST00000364986 107 ntBASIC-0.15□□□□□ -2.43
TOP2AP11388 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
TOP2AP11388 RNU2-21P-201ENST00000410368 188 ntBASIC-0.15□□□□□ -2.43
TOP2AP11388 AL449283.1-202ENST00000418249 604 ntBASIC-0.15□□□□□ -2.43
TOP2AP11388 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC-0.15□□□□□ -2.43
TOP2AP11388 AP003049.1-201ENST00000529418 457 ntBASIC-0.15□□□□□ -2.43
TOP2AP11388 LARP7P1-201ENST00000605576 316 ntBASIC-0.15□□□□□ -2.43
TOP2AP11388 SNORD33-201ENST00000362761 85 ntBASIC-0.16□□□□□ -2.43
TOP2AP11388 RNU6-923P-201ENST00000364753 107 ntBASIC-0.16□□□□□ -2.43
TOP2AP11388 RNY4P3-201ENST00000365254 95 ntBASIC-0.16□□□□□ -2.43
TOP2AP11388 Z77249.1-201ENST00000444622 1175 ntBASIC-0.16□□□□□ -2.43
TOP2AP11388 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC-0.16□□□□□ -2.43
TOP2AP11388 PDCD5P2-201ENST00000507570 312 ntBASIC-0.16□□□□□ -2.43
TOP2AP11388 AC112206.3-201ENST00000514578 389 ntBASIC-0.16□□□□□ -2.43
TOP2AP11388 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC-0.16□□□□□ -2.44
TOP2AP11388 RNU1-119P-201ENST00000391122 165 ntBASIC-0.17□□□□□ -2.44
TOP2AP11388 AL590556.1-201ENST00000423231 483 ntBASIC-0.17□□□□□ -2.44
TOP2AP11388 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC-0.17□□□□□ -2.44
TOP2AP11388 AC108740.1-201ENST00000498629 225 ntBASIC-0.17□□□□□ -2.44
TOP2AP11388 MIR3678-201ENST00000578455 94 ntBASIC-0.17□□□□□ -2.44
TOP2AP11388 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC-0.17□□□□□ -2.44
TOP2AP11388 AC108676.2-201ENST00000605225 163 ntBASIC-0.17□□□□□ -2.44
TOP2AP11388 SNORD114-24-201ENST00000365029 72 ntBASIC-0.18□□□□□ -2.44
TOP2AP11388 MIR214-201ENST00000385214 110 ntBASIC-0.18□□□□□ -2.44
TOP2AP11388 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC-0.18□□□□□ -2.44
TOP2AP11388 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC-0.18□□□□□ -2.44
TOP2AP11388 CYP3A52P-201ENST00000563326 91 ntBASIC-0.18□□□□□ -2.44
TOP2AP11388 AC069294.1-201ENST00000608397 350 ntBASIC-0.18□□□□□ -2.44
TOP2AP11388 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.18□□□□□ -2.44
TOP2AP11388 U8.7-201ENST00000364940 136 ntBASIC-0.18□□□□□ -2.44
TOP2AP11388 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC-0.18□□□□□ -2.44
TOP2AP11388 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC-0.18□□□□□ -2.44
TOP2AP11388 RNU6-943P-201ENST00000516960 98 ntBASIC-0.18□□□□□ -2.44
TOP2AP11388 OR5AK1P-201ENST00000524837 922 ntBASIC-0.18□□□□□ -2.44
TOP2AP11388 AC040896.1-201ENST00000613819 479 ntBASIC-0.18□□□□□ -2.44
TOP2AP11388 SNORD95.1-201ENST00000364099 68 ntBASIC-0.19□□□□□ -2.44
TOP2AP11388 RNU4-12P-201ENST00000365233 139 ntBASIC-0.19□□□□□ -2.44
TOP2AP11388 RNU6-945P-201ENST00000383947 107 ntBASIC-0.19□□□□□ -2.44
TOP2AP11388 AL589994.1-201ENST00000404962 340 ntBASIC-0.19□□□□□ -2.44
TOP2AP11388 RPS24P7-201ENST00000416921 246 ntBASIC-0.19□□□□□ -2.44
TOP2AP11388 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.19□□□□□ -2.44
TOP2AP11388 MTATP6P9-201ENST00000515039 680 ntBASIC-0.19□□□□□ -2.44
TOP2AP11388 Z98751.3-201ENST00000604447 521 ntBASIC-0.19□□□□□ -2.44
TOP2AP11388 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC-0.19□□□□□ -2.44
TOP2AP11388 AC097372.5-201ENST00000623665 376 ntBASIC-0.19□□□□□ -2.44
TOP2AP11388 MIR101-1-201ENST00000362265 75 ntBASIC-0.2□□□□□ -2.44
TOP2AP11388 SNORD44.1-201ENST00000363202 61 ntBASIC-0.2□□□□□ -2.44
TOP2AP11388 RNU6-420P-201ENST00000458780 107 ntBASIC-0.2□□□□□ -2.44
TOP2AP11388 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.2□□□□□ -2.44
TOP2AP11388 AC073349.3-201ENST00000617616 186 ntBASIC-0.2□□□□□ -2.44
TOP2AP11388 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
TOP2AP11388 RNU6-1327P-201ENST00000365302 105 ntBASIC-0.21□□□□□ -2.44
TOP2AP11388 snoU13.19-201ENST00000459148 104 ntBASIC-0.21□□□□□ -2.44
TOP2AP11388 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.21□□□□□ -2.44
TOP2AP11388 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC-0.21□□□□□ -2.44
TOP2AP11388 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC-0.21□□□□□ -2.44
TOP2AP11388 AC010738.1-201ENST00000604970 987 ntBASIC-0.21□□□□□ -2.44
TOP2AP11388 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.21□□□□□ -2.44
TOP2AP11388 AL513185.3-201ENST00000433335 1300 ntBASIC-0.21□□□□□ -2.44
TOP2AP11388 RNU4-73P-201ENST00000363164 141 ntBASIC-0.22□□□□□ -2.44
TOP2AP11388 RNU4-45P-201ENST00000365469 141 ntBASIC-0.22□□□□□ -2.44
TOP2AP11388 AC092423.1-201ENST00000430165 186 ntBASIC-0.22□□□□□ -2.44
TOP2AP11388 HMGN2P34-201ENST00000437647 269 ntBASIC-0.22□□□□□ -2.44
TOP2AP11388 AC027119.1-201ENST00000440877 241 ntBASIC-0.22□□□□□ -2.44
TOP2AP11388 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC-0.22□□□□□ -2.44
TOP2AP11388 MTND4P20-201ENST00000424125 869 ntBASIC-0.23□□□□□ -2.45
TOP2AP11388 PTGES3P4-201ENST00000426243 356 ntBASIC-0.23□□□□□ -2.45
TOP2AP11388 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC-0.23□□□□□ -2.45
TOP2AP11388 AC015849.6-201ENST00000605454 474 ntBASIC-0.23□□□□□ -2.45
TOP2AP11388 AL158163.2-201ENST00000619110 700 ntBASIC-0.23□□□□□ -2.45
TOP2AP11388 AC015726.3-201ENST00000624501 418 ntBASIC-0.23□□□□□ -2.45
TOP2AP11388 SNORA32.1-201ENST00000364514 115 ntBASIC-0.23□□□□□ -2.45
TOP2AP11388 MT-TP-201ENST00000387461 68 ntBASIC-0.23□□□□□ -2.45
TOP2AP11388 RPL7P43-201ENST00000478876 753 ntBASIC-0.23□□□□□ -2.45
TOP2AP11388 BOLA3P3-201ENST00000505182 232 ntBASIC-0.23□□□□□ -2.45
TOP2AP11388 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC-0.23□□□□□ -2.45
TOP2AP11388 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
TOP2AP11388 AC012669.1-201ENST00000603209 283 ntBASIC-0.23□□□□□ -2.45
TOP2AP11388 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC-0.23□□□□□ -2.45
TOP2AP11388 AC068057.2-201ENST00000624047 895 ntBASIC-0.23□□□□□ -2.45
TOP2AP11388 AC106858.1-201ENST00000637497 429 ntBASIC-0.23□□□□□ -2.45
TOP2AP11388 RNU6-514P-201ENST00000384208 107 ntBASIC-0.24□□□□□ -2.45
TOP2AP11388 RNU6-1237P-201ENST00000384777 107 ntBASIC-0.24□□□□□ -2.45
TOP2AP11388 HMGN2P22-201ENST00000427588 175 ntBASIC-0.24□□□□□ -2.45
TOP2AP11388 AL121578.1-201ENST00000428051 892 ntBASIC-0.24□□□□□ -2.45
TOP2AP11388 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
TOP2AP11388 AC025465.3-201ENST00000510570 311 ntBASIC-0.24□□□□□ -2.45
TOP2AP11388 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.24□□□□□ -2.45
TOP2AP11388 AL009028.1-201ENST00000604895 802 ntBASIC-0.24□□□□□ -2.45
TOP2AP11388 AP001596.2-201ENST00000608410 312 ntBASIC-0.24□□□□□ -2.45
TOP2AP11388 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC-0.24□□□□□ -2.45
TOP2AP11388 RNA5SP98-201ENST00000363158 137 ntBASIC-0.25□□□□□ -2.45
TOP2AP11388 MIR604-201ENST00000384880 94 ntBASIC-0.25□□□□□ -2.45
TOP2AP11388 RNU2-7P-201ENST00000410794 178 ntBASIC-0.25□□□□□ -2.45
TOP2AP11388 AC022493.2-201ENST00000506122 481 ntBASIC-0.25□□□□□ -2.45
TOP2AP11388 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.25□□□□□ -2.45
TOP2AP11388 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC-0.25□□□□□ -2.45
TOP2AP11388 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC-0.25□□□□□ -2.45
TOP2AP11388 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms