Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC245054.2-201ENST00000415639 319 ntBASIC3.15□□□□□ -1.91
MMP3P08254 AC009161.1-201ENST00000417306 376 ntBASIC3.15□□□□□ -1.91
MMP3P08254 PDCL2P1-201ENST00000419302 352 ntBASIC3.15□□□□□ -1.91
MMP3P08254 AL512844.2-201ENST00000433990 593 ntBASIC3.15□□□□□ -1.91
MMP3P08254 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.15□□□□□ -1.91
MMP3P08254 RPL7P12-201ENST00000446719 750 ntBASIC3.15□□□□□ -1.91
MMP3P08254 AL360271.2-201ENST00000447710 161 ntBASIC3.15□□□□□ -1.91
MMP3P08254 FABP5P15-201ENST00000453566 214 ntBASIC3.15□□□□□ -1.91
MMP3P08254 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.15□□□□□ -1.91
MMP3P08254 RNA5SP310-201ENST00000459084 116 ntBASIC3.15□□□□□ -1.91
MMP3P08254 AC007547.1-201ENST00000462177 490 ntBASIC3.15□□□□□ -1.91
MMP3P08254 TRBV1-201ENST00000476502 284 ntBASIC3.15□□□□□ -1.91
MMP3P08254 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.15□□□□□ -1.91
MMP3P08254 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.15□□□□□ -1.91
MMP3P08254 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.15□□□□□ -1.91
MMP3P08254 AC046134.1-201ENST00000514454 666 ntBASIC3.15□□□□□ -1.91
MMP3P08254 RNU2-69P-201ENST00000516061 100 ntBASIC3.15□□□□□ -1.91
MMP3P08254 RNU4-49P-201ENST00000516080 140 ntBASIC3.15□□□□□ -1.91
MMP3P08254 RNU6-273P-201ENST00000516937 96 ntBASIC3.15□□□□□ -1.91
MMP3P08254 RNU6-1315P-201ENST00000517187 99 ntBASIC3.15□□□□□ -1.91
MMP3P08254 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.15□□□□□ -1.91
MMP3P08254 AP000763.2-201ENST00000540641 163 ntBASIC3.15□□□□□ -1.91
MMP3P08254 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.15□□□□□ -1.91
MMP3P08254 VN1R80P-201ENST00000597126 338 ntBASIC3.15□□□□□ -1.91
MMP3P08254 AC012119.1-201ENST00000603184 222 ntBASIC3.15□□□□□ -1.91
MMP3P08254 AL357078.3-201ENST00000607528 618 ntBASIC3.15□□□□□ -1.91
MMP3P08254 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
MMP3P08254 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.15□□□□□ -1.91
MMP3P08254 RNU6-845P-201ENST00000362578 103 ntBASIC3.14□□□□□ -1.91
MMP3P08254 MIR34A-201ENST00000385130 110 ntBASIC3.14□□□□□ -1.91
MMP3P08254 AL138827.1-201ENST00000402666 306 ntBASIC3.14□□□□□ -1.91
MMP3P08254 POLHP1-201ENST00000411806 470 ntBASIC3.14□□□□□ -1.91
MMP3P08254 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.14□□□□□ -1.91
MMP3P08254 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.14□□□□□ -1.91
MMP3P08254 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.14□□□□□ -1.91
MMP3P08254 Z82210.1-201ENST00000440037 231 ntBASIC3.14□□□□□ -1.91
MMP3P08254 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.14□□□□□ -1.91
MMP3P08254 RPL12P25-201ENST00000455592 494 ntBASIC3.14□□□□□ -1.91
MMP3P08254 RPS15AP34-201ENST00000487776 387 ntBASIC3.14□□□□□ -1.91
MMP3P08254 Y_RNA.654-201ENST00000497848 106 ntBASIC3.14□□□□□ -1.91
MMP3P08254 MTND4LP22-201ENST00000508209 276 ntBASIC3.14□□□□□ -1.91
MMP3P08254 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.14□□□□□ -1.91
MMP3P08254 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.14□□□□□ -1.91
MMP3P08254 RNU6-143P-201ENST00000516942 93 ntBASIC3.14□□□□□ -1.91
MMP3P08254 RNA5SP291-201ENST00000517222 105 ntBASIC3.14□□□□□ -1.91
MMP3P08254 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.14□□□□□ -1.91
MMP3P08254 ATP5F1P5-201ENST00000526403 760 ntBASIC3.14□□□□□ -1.91
MMP3P08254 OR11H5P-201ENST00000554039 926 ntBASIC3.14□□□□□ -1.91
MMP3P08254 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.14□□□□□ -1.91
MMP3P08254 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.14□□□□□ -1.91
MMP3P08254 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.14□□□□□ -1.91
MMP3P08254 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.14□□□□□ -1.91
MMP3P08254 AL121757.2-201ENST00000611223 313 ntBASIC3.14□□□□□ -1.91
MMP3P08254 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
MMP3P08254 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
MMP3P08254 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
MMP3P08254 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MMP3P08254 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.13□□□□□ -1.91
MMP3P08254 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.13□□□□□ -1.91
MMP3P08254 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.13□□□□□ -1.91
MMP3P08254 RNU6-45P-201ENST00000384471 107 ntBASIC3.13□□□□□ -1.91
MMP3P08254 RNU6-831P-201ENST00000384548 107 ntBASIC3.13□□□□□ -1.91
MMP3P08254 MIR9-1-201ENST00000385198 89 ntBASIC3.13□□□□□ -1.91
MMP3P08254 AL591034.1-201ENST00000407447 340 ntBASIC3.13□□□□□ -1.91
MMP3P08254 RNU6-1025P-201ENST00000410629 104 ntBASIC3.13□□□□□ -1.91
MMP3P08254 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.13□□□□□ -1.91
MMP3P08254 AL591704.1-201ENST00000432574 275 ntBASIC3.13□□□□□ -1.91
MMP3P08254 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.13□□□□□ -1.91
MMP3P08254 HIGD1AP11-201ENST00000438361 280 ntBASIC3.13□□□□□ -1.91
MMP3P08254 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.13□□□□□ -1.91
MMP3P08254 AC087884.1-201ENST00000469738 328 ntBASIC3.13□□□□□ -1.91
MMP3P08254 AP000852.1-201ENST00000472460 573 ntBASIC3.13□□□□□ -1.91
MMP3P08254 AC091885.1-201ENST00000506658 268 ntBASIC3.13□□□□□ -1.91
MMP3P08254 MTND3P25-201ENST00000509243 135 ntBASIC3.13□□□□□ -1.91
MMP3P08254 RNU6-189P-201ENST00000516120 101 ntBASIC3.13□□□□□ -1.91
MMP3P08254 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.13□□□□□ -1.91
MMP3P08254 RNA5SP165-201ENST00000517142 115 ntBASIC3.13□□□□□ -1.91
MMP3P08254 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.13□□□□□ -1.91
MMP3P08254 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.13□□□□□ -1.91
MMP3P08254 AP003122.3-201ENST00000526316 255 ntBASIC3.13□□□□□ -1.91
MMP3P08254 AC084851.1-201ENST00000529105 249 ntBASIC3.13□□□□□ -1.91
MMP3P08254 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.13□□□□□ -1.91
MMP3P08254 AL157871.3-201ENST00000557231 293 ntBASIC3.13□□□□□ -1.91
MMP3P08254 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MMP3P08254 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.13□□□□□ -1.91
MMP3P08254 MIR548AC-201ENST00000585049 88 ntBASIC3.13□□□□□ -1.91
MMP3P08254 AC091135.1-201ENST00000585943 307 ntBASIC3.13□□□□□ -1.91
MMP3P08254 AC004805.2-201ENST00000605382 482 ntBASIC3.13□□□□□ -1.91
MMP3P08254 AC021646.1-201ENST00000605469 484 ntBASIC3.13□□□□□ -1.91
MMP3P08254 U2.17-201ENST00000611454 95 ntBASIC3.13□□□□□ -1.91
MMP3P08254 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.13□□□□□ -1.91
MMP3P08254 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
MMP3P08254 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
MMP3P08254 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MMP3P08254 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.12□□□□□ -1.91
MMP3P08254 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
MMP3P08254 RNU6-859P-201ENST00000362728 107 ntBASIC3.12□□□□□ -1.91
MMP3P08254 RNU6-371P-201ENST00000364283 108 ntBASIC3.12□□□□□ -1.91
MMP3P08254 SNORD81.2-201ENST00000365153 76 ntBASIC3.12□□□□□ -1.91
MMP3P08254 RNU6-1179P-201ENST00000384667 107 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 210.6 ms