Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 DUSP12P1-201ENST00000612874 516 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.75□□□□□ -1.97
COL2A1P02458 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL2A1P02458 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.75□□□□□ -1.97
COL2A1P02458 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.75□□□□□ -1.97
COL2A1P02458 AC009487.4-201ENST00000624969 3585 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 PHKBP1-201ENST00000450951 1951 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 AL136964.1-201ENST00000622038 2990 ntBASIC2.75□□□□□ -1.97
COL2A1P02458 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.74□□□□□ -1.97
COL2A1P02458 AC092447.10-201ENST00000620607 1652 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
COL2A1P02458 ZNF355P-201ENST00000427301 3216 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 RNU6-28P-201ENST00000362378 107 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 Y_RNA.128-201ENST00000363391 112 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 Y_RNA.144-201ENST00000363521 113 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 Y_RNA.146-201ENST00000363549 102 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 Y_RNA.269-201ENST00000364685 89 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 Y_RNA.315-201ENST00000365117 102 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 RNU4-66P-201ENST00000365199 138 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 SNORA22B-201ENST00000383876 138 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 RNU6-1207P-201ENST00000384343 107 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 SNORD116-29-201ENST00000384516 83 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 RNU6-1160P-201ENST00000384546 104 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 MTCYBP4-201ENST00000401524 249 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 Y_RNA.595-201ENST00000410403 105 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 RN7SKP123-201ENST00000410732 291 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.74□□□□□ -1.97
COL2A1P02458 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.74□□□□□ -1.97
COL2A1P02458 AL451054.2-201ENST00000420896 202 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 AC096632.1-201ENST00000427395 310 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 Z82205.1-201ENST00000428456 297 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.74□□□□□ -1.97
COL2A1P02458 OR4K11P-201ENST00000431829 904 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 AL160004.2-201ENST00000432935 350 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 AC124916.1-201ENST00000444020 547 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 RPS29P15-201ENST00000458329 171 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 RNU6-1208P-201ENST00000459588 107 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 AL163973.1-201ENST00000484753 577 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 AC083904.1-201ENST00000487828 231 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 RPS15AP36-201ENST00000492022 382 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.74□□□□□ -1.97
COL2A1P02458 RNA5SP385-201ENST00000515947 110 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 RNU6-1137P-201ENST00000517073 99 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.74□□□□□ -1.97
COL2A1P02458 OR4P1P-201ENST00000530808 1136 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.74□□□□□ -1.97
COL2A1P02458 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.74□□□□□ -1.97
COL2A1P02458 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.74□□□□□ -1.97
COL2A1P02458 OR4K8P-201ENST00000578842 1048 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.74□□□□□ -1.97
COL2A1P02458 AC100830.2-201ENST00000581636 240 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 MIR4506-201ENST00000584693 77 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.74□□□□□ -1.97
COL2A1P02458 CTHRC1P1-201ENST00000605383 469 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 RNU6-89P-201ENST00000606519 100 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 AC116447.1-201ENST00000613153 453 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 uc_338.15-201ENST00000615470 191 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.74□□□□□ -1.97
COL2A1P02458 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
COL2A1P02458 EXOC5P1-201ENST00000510543 1969 ntBASIC2.74□□□□□ -1.97
COL2A1P02458 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL2A1P02458 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL2A1P02458 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
COL2A1P02458 Y_RNA.140-201ENST00000363474 103 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 SNORA4.3-201ENST00000365564 137 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 Y_RNA.445-201ENST00000384168 102 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 MIR649-201ENST00000384843 97 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
COL2A1P02458 HMGB1P17-201ENST00000403495 628 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.73□□□□□ -1.97
COL2A1P02458 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.73□□□□□ -1.97
COL2A1P02458 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.73□□□□□ -1.97
COL2A1P02458 IPO7P1-201ENST00000442031 636 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 AC007547.1-201ENST00000462177 490 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 PABPC1P3-201ENST00000469174 459 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 TRBV1-201ENST00000476502 284 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 RPL23AP49-201ENST00000492925 468 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.73□□□□□ -1.97
COL2A1P02458 AC107222.1-201ENST00000510899 637 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 RNU6-1170P-201ENST00000515974 106 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 SNORD60.2-201ENST00000516883 86 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 Y_RNA.718-201ENST00000517110 102 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.73□□□□□ -1.97
COL2A1P02458 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.73□□□□□ -1.97
COL2A1P02458 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.73□□□□□ -1.97
COL2A1P02458 MIR4504-201ENST00000577413 92 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 MIR3146-201ENST00000580367 79 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 POLR3GP2-201ENST00000588366 668 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 SNRPGP17-201ENST00000603780 214 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 AC113194.1-201ENST00000606037 500 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 AL355802.3-201ENST00000607571 545 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.73□□□□□ -1.97
COL2A1P02458 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 MIR6766-201ENST00000622641 72 ntBASIC2.73□□□□□ -1.97
COL2A1P02458 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.73□□□□□ -1.97
COL2A1P02458 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms