Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
POLR1AO95602 AC006199.1-201ENST00000548728 219 ntBASIC0.38□□□□□ -2.35
POLR1AO95602 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.38□□□□□ -2.35
POLR1AO95602 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.38□□□□□ -2.35
POLR1AO95602 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.38□□□□□ -2.35
POLR1AO95602 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.38□□□□□ -2.35
POLR1AO95602 AL022718.1-201ENST00000412004 84 ntBASIC0.38□□□□□ -2.35
POLR1AO95602 AC096649.2-201ENST00000416186 393 ntBASIC0.38□□□□□ -2.35
POLR1AO95602 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.38□□□□□ -2.35
POLR1AO95602 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.38□□□□□ -2.35
POLR1AO95602 AC006512.1-201ENST00000468816 291 ntBASIC0.38□□□□□ -2.35
POLR1AO95602 SNORA31.6-201ENST00000516241 130 ntBASIC0.38□□□□□ -2.35
POLR1AO95602 AL359854.1-201ENST00000614203 1594 ntBASIC0.37□□□□□ -2.35
POLR1AO95602 MTND4P16-201ENST00000466108 1367 ntBASIC0.37□□□□□ -2.35
POLR1AO95602 Y_RNA.303-201ENST00000364998 94 ntBASIC0.37□□□□□ -2.35
POLR1AO95602 RNU6-217P-201ENST00000384164 104 ntBASIC0.37□□□□□ -2.35
POLR1AO95602 MIR95-201ENST00000385072 81 ntBASIC0.37□□□□□ -2.35
POLR1AO95602 RPS27P16-201ENST00000425758 201 ntBASIC0.37□□□□□ -2.35
POLR1AO95602 MED14P1-201ENST00000430517 648 ntBASIC0.37□□□□□ -2.35
POLR1AO95602 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.37□□□□□ -2.35
POLR1AO95602 TAAR7P-201ENST00000436141 242 ntBASIC0.37□□□□□ -2.35
POLR1AO95602 PGBD4P5-201ENST00000445958 426 ntBASIC0.37□□□□□ -2.35
POLR1AO95602 SNORA4.4-201ENST00000515921 135 ntBASIC0.37□□□□□ -2.35
POLR1AO95602 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.37□□□□□ -2.35
POLR1AO95602 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.37□□□□□ -2.35
POLR1AO95602 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.37□□□□□ -2.35
POLR1AO95602 SNRPGP17-201ENST00000603780 214 ntBASIC0.37□□□□□ -2.35
POLR1AO95602 AC010738.1-201ENST00000604970 987 ntBASIC0.37□□□□□ -2.35
POLR1AO95602 AC024060.1-201ENST00000607052 494 ntBASIC0.37□□□□□ -2.35
POLR1AO95602 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.37□□□□□ -2.35
POLR1AO95602 AC009233.1-201ENST00000616477 371 ntBASIC0.37□□□□□ -2.35
POLR1AO95602 AC024581.2-201ENST00000619986 252 ntBASIC0.37□□□□□ -2.35
POLR1AO95602 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.37□□□□□ -2.35
POLR1AO95602 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
POLR1AO95602 RNU6-452P-201ENST00000384406 107 ntBASIC0.36□□□□□ -2.35
POLR1AO95602 MIR506-201ENST00000384998 124 ntBASIC0.36□□□□□ -2.35
POLR1AO95602 USP9YP26-201ENST00000421008 661 ntBASIC0.36□□□□□ -2.35
POLR1AO95602 USP9YP18-201ENST00000425912 695 ntBASIC0.36□□□□□ -2.35
POLR1AO95602 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.36□□□□□ -2.35
POLR1AO95602 USP9YP24-201ENST00000434374 697 ntBASIC0.36□□□□□ -2.35
POLR1AO95602 USP9YP17-201ENST00000444617 696 ntBASIC0.36□□□□□ -2.35
POLR1AO95602 DDX3P2-201ENST00000446138 111 ntBASIC0.36□□□□□ -2.35
POLR1AO95602 AC073569.3-201ENST00000619055 682 ntBASIC0.36□□□□□ -2.35
POLR1AO95602 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.36□□□□□ -2.35
POLR1AO95602 RNU5E-1-201ENST00000362477 120 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.35□□□□□ -2.35
POLR1AO95602 MIR29C-201ENST00000385231 88 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.35□□□□□ -2.35
POLR1AO95602 NCOR1P3-201ENST00000420479 303 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.35□□□□□ -2.35
POLR1AO95602 MTCO1P53-201ENST00000441633 699 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.35□□□□□ -2.35
POLR1AO95602 RNU4-77P-201ENST00000516692 156 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.35□□□□□ -2.35
POLR1AO95602 AL161729.4-201ENST00000604650 476 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 AC006213.4-201ENST00000616184 634 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 AC091965.5-201ENST00000624785 342 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 AC099654.5-201ENST00000636479 350 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.35□□□□□ -2.35
POLR1AO95602 Y_RNA.549-201ENST00000384657 102 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 RNU2-36P-201ENST00000410361 191 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.35□□□□□ -2.35
POLR1AO95602 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 RPS15AP5-201ENST00000436276 388 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 AC097499.1-201ENST00000444277 208 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
POLR1AO95602 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.35□□□□□ -2.35
POLR1AO95602 AC104629.2-201ENST00000468627 598 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 RPS26P55-201ENST00000471178 356 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 AL133373.1-201ENST00000497098 94 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.35□□□□□ -2.35
POLR1AO95602 AC022616.2-201ENST00000523185 300 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.35□□□□□ -2.35
POLR1AO95602 ADAM3B-201ENST00000569937 840 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 FTX_3.1-201ENST00000610451 147 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 FAM157A-202ENST00000615155 405 ntBASIC0.35□□□□□ -2.35
POLR1AO95602 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
POLR1AO95602 ZNF863P-201ENST00000426746 417 ntBASIC0.34□□□□□ -2.36
POLR1AO95602 RPL23AP95-201ENST00000426806 265 ntBASIC0.34□□□□□ -2.36
POLR1AO95602 AC024082.2-201ENST00000434771 238 ntBASIC0.34□□□□□ -2.36
POLR1AO95602 MTCO2P20-201ENST00000437339 673 ntBASIC0.34□□□□□ -2.36
POLR1AO95602 MTND4P6-201ENST00000438297 472 ntBASIC0.34□□□□□ -2.36
POLR1AO95602 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.34□□□□□ -2.36
POLR1AO95602 HSPE1P13-201ENST00000451143 297 ntBASIC0.34□□□□□ -2.36
POLR1AO95602 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.34□□□□□ -2.36
POLR1AO95602 AC087477.1-201ENST00000465747 340 ntBASIC0.34□□□□□ -2.36
POLR1AO95602 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.34□□□□□ -2.36
POLR1AO95602 AC145146.1-201ENST00000496370 254 ntBASIC0.34□□□□□ -2.36
POLR1AO95602 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.36
POLR1AO95602 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.34□□□□□ -2.36
POLR1AO95602 BNIP3P16-201ENST00000589779 534 ntBASIC0.34□□□□□ -2.36
POLR1AO95602 MTCO2P2-201ENST00000591258 225 ntBASIC0.34□□□□□ -2.36
POLR1AO95602 AC073968.1-201ENST00000618594 637 ntBASIC0.34□□□□□ -2.36
POLR1AO95602 AC018926.3-201ENST00000618841 406 ntBASIC0.34□□□□□ -2.36
POLR1AO95602 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.34□□□□□ -2.36
POLR1AO95602 AC090772.4-201ENST00000623599 362 ntBASIC0.34□□□□□ -2.36
POLR1AO95602 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.34□□□□□ -2.36
POLR1AO95602 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms