Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RNU6ATAC-201ENST00000408749 126 ntBASIC3.4□□□□□ -1.87
PHGDHO43175 RNU2-49P-201ENST00000410666 184 ntBASIC3.4□□□□□ -1.87
PHGDHO43175 RPL37P10-201ENST00000412884 288 ntBASIC3.4□□□□□ -1.87
PHGDHO43175 AL356968.1-201ENST00000416622 474 ntBASIC3.4□□□□□ -1.87
PHGDHO43175 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PHGDHO43175 AC021205.2-201ENST00000480069 347 ntBASIC3.4□□□□□ -1.87
PHGDHO43175 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.4□□□□□ -1.87
PHGDHO43175 AC022634.1-201ENST00000520765 532 ntBASIC3.4□□□□□ -1.87
PHGDHO43175 AC093331.1-201ENST00000521474 169 ntBASIC3.4□□□□□ -1.87
PHGDHO43175 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.4□□□□□ -1.87
PHGDHO43175 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.4□□□□□ -1.87
PHGDHO43175 AC135507.2-201ENST00000612443 309 ntBASIC3.4□□□□□ -1.87
PHGDHO43175 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.4□□□□□ -1.87
PHGDHO43175 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PHGDHO43175 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.4□□□□□ -1.87
PHGDHO43175 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PHGDHO43175 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 RNA5SP197-201ENST00000363357 119 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PHGDHO43175 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PHGDHO43175 Y_RNA.384-201ENST00000383909 102 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 RN7SKP158-201ENST00000410453 326 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 AC126124.2-201ENST00000413542 321 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 AC245291.1-201ENST00000419501 328 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.39□□□□□ -1.87
PHGDHO43175 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.39□□□□□ -1.87
PHGDHO43175 RNU7-187P-201ENST00000458985 68 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 Y_RNA.635-201ENST00000459041 101 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 RPL23AP67-201ENST00000465341 474 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 AC116655.1-201ENST00000508324 901 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 AC104619.4-201ENST00000510773 249 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.39□□□□□ -1.87
PHGDHO43175 RNU6-377P-201ENST00000515965 102 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 RN7SKP18-201ENST00000516005 275 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 GLYCAM1-201ENST00000546596 285 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.39□□□□□ -1.87
PHGDHO43175 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.39□□□□□ -1.87
PHGDHO43175 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 POLR3GP2-201ENST00000588366 668 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PHGDHO43175 AL121772.2-201ENST00000614331 297 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 AC010378.1-201ENST00000619270 362 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 MFSD8-233ENST00000641482 4860 ntBASIC3.39□□□□□ -1.87
PHGDHO43175 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
PHGDHO43175 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PHGDHO43175 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PHGDHO43175 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.38□□□□□ -1.87
PHGDHO43175 RNU6-858P-201ENST00000362436 107 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 RNA5SP124-201ENST00000362739 110 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 RNU6-942P-201ENST00000363002 107 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 SNORA73.2-201ENST00000364946 201 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 RNU6-805P-201ENST00000365643 106 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 Y_RNA.535-201ENST00000384612 99 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 AL117339.3-201ENST00000418733 162 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 ARF4P2-201ENST00000430209 526 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.38□□□□□ -1.87
PHGDHO43175 RPS15AP10-201ENST00000432472 382 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 AL645568.3-201ENST00000433683 316 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 AL161651.1-201ENST00000440882 223 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.38□□□□□ -1.87
PHGDHO43175 RN7SL330P-201ENST00000469709 307 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 AK3P2-201ENST00000507976 429 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 SNORA43.2-201ENST00000516652 128 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 AC103996.1-201ENST00000555468 102 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 AL160281.1-201ENST00000605307 311 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 AC016727.1-205ENST00000605437 569 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 MIR6128-201ENST00000615528 109 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.38□□□□□ -1.87
PHGDHO43175 AC244517.12-201ENST00000623581 663 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 U4.7-201ENST00000638126 106 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 ZNF826P-207ENST00000622273 1910 ntBASIC3.38□□□□□ -1.87
PHGDHO43175 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PHGDHO43175 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PHGDHO43175 AC007496.3-201ENST00000624987 3443 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PHGDHO43175 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.37□□□□□ -1.87
PHGDHO43175 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PHGDHO43175 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 Y_RNA.67-201ENST00000362870 100 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 RNU6-428P-201ENST00000362942 107 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.37□□□□□ -1.87
PHGDHO43175 AL359837.1-201ENST00000381357 287 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.37□□□□□ -1.87
PHGDHO43175 FTH1P15-201ENST00000406984 280 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
PHGDHO43175 CYCSP19-201ENST00000411715 316 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 MTND4P28-201ENST00000426217 387 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.37□□□□□ -1.87
PHGDHO43175 FABP5P14-201ENST00000437273 393 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 HMGN1P18-201ENST00000457642 277 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 SNORD105B-201ENST00000458770 79 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 RNU6-1037P-201ENST00000459571 107 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 RPS27P29-201ENST00000463110 252 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.37□□□□□ -1.87
PHGDHO43175 AC025518.1-201ENST00000479856 347 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 MRPL42P6-201ENST00000486397 371 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 AC018437.1-201ENST00000492214 406 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.37□□□□□ -1.87
PHGDHO43175 PHBP14-201ENST00000512887 367 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms