Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXN1O15353 AC008267.5-201ENST00000424928 265 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXN1O15353 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXN1O15353 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.86□□□□□ -1.79
FOXN1O15353 AL162388.1-201ENST00000450912 352 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 AL109933.2-201ENST00000452651 260 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXN1O15353 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXN1O15353 SCARNA18-201ENST00000459004 134 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 RPL37P6-202ENST00000464216 403 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 RNU6-189P-201ENST00000516120 101 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 RNU6-1016P-201ENST00000516689 94 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXN1O15353 AC023442.1-201ENST00000531247 422 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.86□□□□□ -1.79
FOXN1O15353 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.86□□□□□ -1.79
FOXN1O15353 H3F3AP1-201ENST00000559984 334 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 AC009229.3-201ENST00000608056 282 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 AC062037.2-201ENST00000610137 73 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 AC107871.2-201ENST00000612894 502 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 AL590099.1-201ENST00000615276 138 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
FOXN1O15353 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
FOXN1O15353 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXN1O15353 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.86□□□□□ -1.79
FOXN1O15353 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FOXN1O15353 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXN1O15353 SNORD82-201ENST00000365530 70 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 Y_RNA.389-201ENST00000383924 113 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 RNU6-328P-201ENST00000390887 106 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 RNU6-1109P-201ENST00000391187 107 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 SNORA75.6-201ENST00000391318 127 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXN1O15353 AC093106.2-201ENST00000428212 385 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 AC016696.1-201ENST00000446949 318 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 AL353691.1-201ENST00000451332 387 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 PCNPP5-201ENST00000452246 481 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 SNORD121B-201ENST00000458838 81 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 RNU7-59P-201ENST00000459101 61 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 AC021205.2-201ENST00000480069 347 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 HIGD1AP13-201ENST00000509878 289 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 TBCAP3-201ENST00000512475 312 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.85□□□□□ -1.79
FOXN1O15353 RNU6-470P-201ENST00000515954 104 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 RNU6-120P-201ENST00000516077 103 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 Y_RNA.670-201ENST00000516255 105 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 RNA5SP367-201ENST00000516557 118 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 SNORA70.19-201ENST00000516717 90 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 RN7SKP277-201ENST00000516895 283 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 RNU6-798P-201ENST00000516912 103 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 RN7SKP60-201ENST00000516985 239 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FOXN1O15353 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXN1O15353 AL133271.1-201ENST00000538229 291 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.85□□□□□ -1.79
FOXN1O15353 AL133153.1-201ENST00000557756 303 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXN1O15353 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXN1O15353 AC100812.1-201ENST00000607622 580 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 AC078938.1-201ENST00000620993 318 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 AC093908.1-201ENST00000623125 8092 ntBASIC3.85□□□□□ -1.79
FOXN1O15353 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
FOXN1O15353 TPTE2P4-201ENST00000258589 1605 ntBASIC3.84□□□□□ -1.79
FOXN1O15353 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
FOXN1O15353 RNU6-562P-201ENST00000362731 107 ntBASIC3.84□□□□□ -1.79
FOXN1O15353 RNU6-550P-201ENST00000391057 101 ntBASIC3.84□□□□□ -1.79
FOXN1O15353 NDUFS5P1-201ENST00000405668 289 ntBASIC3.84□□□□□ -1.79
FOXN1O15353 RNU6-1050P-201ENST00000410388 107 ntBASIC3.84□□□□□ -1.79
FOXN1O15353 RNU4-46P-201ENST00000410818 138 ntBASIC3.84□□□□□ -1.79
FOXN1O15353 EEF1A1P41-201ENST00000414667 207 ntBASIC3.84□□□□□ -1.79
FOXN1O15353 SNAP23P1-201ENST00000433229 246 ntBASIC3.84□□□□□ -1.79
FOXN1O15353 RPS15AP27-201ENST00000449183 343 ntBASIC3.84□□□□□ -1.79
FOXN1O15353 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.84□□□□□ -1.79
FOXN1O15353 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.84□□□□□ -1.79
FOXN1O15353 AC104472.2-201ENST00000469035 601 ntBASIC3.84□□□□□ -1.79
FOXN1O15353 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.84□□□□□ -1.79
FOXN1O15353 AC116337.1-201ENST00000509680 687 ntBASIC3.84□□□□□ -1.79
FOXN1O15353 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FOXN1O15353 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.84□□□□□ -1.79
FOXN1O15353 RNU6-64P-201ENST00000517119 105 ntBASIC3.84□□□□□ -1.79
FOXN1O15353 Y_RNA.721-201ENST00000517207 102 ntBASIC3.84□□□□□ -1.79
FOXN1O15353 AC005476.1-201ENST00000554427 397 ntBASIC3.84□□□□□ -1.79
FOXN1O15353 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.84□□□□□ -1.79
FOXN1O15353 ATP1B3P1-201ENST00000605365 821 ntBASIC3.84□□□□□ -1.79
FOXN1O15353 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
FOXN1O15353 AC005592.1-201ENST00000566527 1640 ntBASIC3.84□□□□□ -1.8
FOXN1O15353 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
FOXN1O15353 RNU6-490P-201ENST00000362985 107 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 RNU6-450P-201ENST00000364654 107 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 Y_RNA.485-201ENST00000384395 102 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 RNU6-1127P-201ENST00000384580 107 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 BX682237.1-201ENST00000415016 335 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.83□□□□□ -1.8
FOXN1O15353 RPS12P23-201ENST00000419579 400 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 AL590632.1-201ENST00000424289 371 ntBASIC3.83□□□□□ -1.8
FOXN1O15353 AL353705.1-201ENST00000433468 480 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms