Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SNORD114-19-201ENST00000363072 75 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 SNORA4.3-201ENST00000365564 137 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
UPK1AO00322 MIR518D-201ENST00000385014 87 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 U8.14-201ENST00000390843 143 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 SNORA40C-201ENST00000391285 128 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
UPK1AO00322 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
UPK1AO00322 AL627390.1-201ENST00000396055 340 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 AL512604.1-201ENST00000404812 257 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 MIR1261-201ENST00000408659 82 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 PGBD4P6-201ENST00000421501 610 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK1AO00322 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 AL591704.1-201ENST00000432574 275 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 DNAJC19P4-201ENST00000440115 345 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 AC010095.1-201ENST00000443543 144 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK1AO00322 AC003071.1-201ENST00000451219 789 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK1AO00322 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.54□□□□□ -2.16
UPK1AO00322 RPS3AP22-201ENST00000488297 769 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK1AO00322 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK1AO00322 RNA5SP137-201ENST00000516833 135 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 RNU6-1092P-201ENST00000516955 87 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 SNORA48.11-201ENST00000517015 89 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 AC107953.1-201ENST00000522216 297 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.54□□□□□ -2.16
UPK1AO00322 CBX3P4-201ENST00000538909 354 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK1AO00322 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK1AO00322 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.54□□□□□ -2.16
UPK1AO00322 BNIP3P40-201ENST00000596017 556 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 AL713866.2-201ENST00000603579 219 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 AC105148.1-201ENST00000604961 409 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 AC006338.1-201ENST00000618453 749 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 AL607023.1-201ENST00000620045 248 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.54□□□□□ -2.16
UPK1AO00322 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
UPK1AO00322 MTND5P10-201ENST00000603719 1809 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.53□□□□□ -2.16
UPK1AO00322 RNA5SP276-201ENST00000362580 94 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 Y_RNA.302-201ENST00000364997 102 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 SNORA25B-201ENST00000365507 128 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 RNU6-395P-201ENST00000365662 106 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 RNU6-157P-201ENST00000383957 107 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 RNU6-166P-201ENST00000384371 107 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 Y_RNA.534-201ENST00000384599 112 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 MIR95-201ENST00000385072 81 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
UPK1AO00322 HMGN2P39-201ENST00000398005 273 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 FTH1P15-201ENST00000406984 280 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
UPK1AO00322 CYCSP49-201ENST00000420810 319 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK1AO00322 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK1AO00322 ZNF702P-202ENST00000434269 1966 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK1AO00322 RPL22P17-201ENST00000438729 315 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK1AO00322 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.53□□□□□ -2.16
UPK1AO00322 AC116347.2-201ENST00000514912 523 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 RNU2-10P-201ENST00000516375 211 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.53□□□□□ -2.16
UPK1AO00322 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK1AO00322 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK1AO00322 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.53□□□□□ -2.16
UPK1AO00322 AC123904.2-201ENST00000548059 300 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.53□□□□□ -2.16
UPK1AO00322 AC026271.5-201ENST00000577873 130 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 MIR1273C-201ENST00000578669 77 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 AC174048.1-201ENST00000603389 144 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 AC025811.1-201ENST00000604312 472 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 AC018638.7-201ENST00000605836 1114 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 AC022202.1-201ENST00000613515 211 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 AC091834.1-201ENST00000614543 472 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.53□□□□□ -2.16
UPK1AO00322 AC006927.4-201ENST00000639187 543 ntBASIC1.53□□□□□ -2.16
UPK1AO00322 RNU6-946P-201ENST00000383878 107 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 RNU6-83P-201ENST00000384568 112 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 MIR504-201ENST00000385065 83 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 RPS20P2-201ENST00000402520 389 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 AL022400.1-201ENST00000423946 935 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.52□□□□□ -2.17
UPK1AO00322 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.52□□□□□ -2.17
UPK1AO00322 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.52□□□□□ -2.17
UPK1AO00322 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.52□□□□□ -2.17
UPK1AO00322 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.52□□□□□ -2.17
UPK1AO00322 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.52□□□□□ -2.17
UPK1AO00322 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.52□□□□□ -2.17
UPK1AO00322 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.52□□□□□ -2.17
UPK1AO00322 UBE2V1P12-201ENST00000503954 474 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 AC091951.3-201ENST00000504093 246 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
UPK1AO00322 SNORA25.15-201ENST00000516487 89 ntBASIC1.52□□□□□ -2.17
UPK1AO00322 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.52□□□□□ -2.17
UPK1AO00322 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms