Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5□□□□□ -1.61
USP17L3A6NCW0 HMGN2P30-201ENST00000423237 256 ntBASIC5□□□□□ -1.61
USP17L3A6NCW0 NDUFB4P6-201ENST00000436819 366 ntBASIC5□□□□□ -1.61
USP17L3A6NCW0 RPS26P21-201ENST00000475397 348 ntBASIC5□□□□□ -1.61
USP17L3A6NCW0 RNU1-103P-201ENST00000516502 125 ntBASIC5□□□□□ -1.61
USP17L3A6NCW0 RNU6-1282P-201ENST00000516735 96 ntBASIC5□□□□□ -1.61
USP17L3A6NCW0 MRPS36P4-201ENST00000534436 298 ntBASIC5□□□□□ -1.61
USP17L3A6NCW0 H3F3AP1-201ENST00000559984 334 ntBASIC5□□□□□ -1.61
USP17L3A6NCW0 MIR4659A-201ENST00000580269 81 ntBASIC5□□□□□ -1.61
USP17L3A6NCW0 AC010928.2-201ENST00000588017 287 ntBASIC5□□□□□ -1.61
USP17L3A6NCW0 RPL23AP88-201ENST00000605759 454 ntBASIC5□□□□□ -1.61
USP17L3A6NCW0 FTX_3.1-201ENST00000610451 147 ntBASIC5□□□□□ -1.61
USP17L3A6NCW0 AC097372.5-201ENST00000623665 376 ntBASIC5□□□□□ -1.61
USP17L3A6NCW0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USP17L3A6NCW0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5□□□□□ -1.61
USP17L3A6NCW0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USP17L3A6NCW0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 RNU6-213P-201ENST00000384051 104 ntBASIC4.99□□□□□ -1.61
USP17L3A6NCW0 RNU6-217P-201ENST00000384164 104 ntBASIC4.99□□□□□ -1.61
USP17L3A6NCW0 MIR548M-201ENST00000408260 86 ntBASIC4.99□□□□□ -1.61
USP17L3A6NCW0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 CYCSP32-201ENST00000440548 321 ntBASIC4.99□□□□□ -1.61
USP17L3A6NCW0 RNA5SP103-201ENST00000459503 118 ntBASIC4.99□□□□□ -1.61
USP17L3A6NCW0 RPL23AP75-201ENST00000491601 451 ntBASIC4.99□□□□□ -1.61
USP17L3A6NCW0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP17L3A6NCW0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
USP17L3A6NCW0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
USP17L3A6NCW0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
USP17L3A6NCW0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.98□□□□□ -1.61
USP17L3A6NCW0 RNU6-222P-201ENST00000362438 107 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 RNU6-600P-201ENST00000362524 99 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 RNA5SP124-201ENST00000362739 110 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 Y_RNA.297-201ENST00000364950 91 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 RNU6-898P-201ENST00000365627 104 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 Z98749.2-208ENST00000381646 500 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP17L3A6NCW0 Y_RNA.602-201ENST00000410535 92 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 RNU2-14P-201ENST00000411053 191 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP17L3A6NCW0 AL356535.1-201ENST00000440335 398 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 RPL23AP65-201ENST00000475608 468 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 FTH1P11-201ENST00000517577 551 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 AL137100.2-201ENST00000555786 315 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 MIR3944-201ENST00000581277 108 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 AC006272.2-201ENST00000594725 163 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 AC073657.2-201ENST00000605661 303 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.98□□□□□ -1.61
USP17L3A6NCW0 AL121772.2-201ENST00000614331 297 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 FTX_2.1-201ENST00000618816 94 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
USP17L3A6NCW0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP17L3A6NCW0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.98□□□□□ -1.61
USP17L3A6NCW0 SRP72P2-201ENST00000344851 1979 ntBASIC4.98□□□□□ -1.61
USP17L3A6NCW0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
USP17L3A6NCW0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP17L3A6NCW0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP17L3A6NCW0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
USP17L3A6NCW0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.97□□□□□ -1.61
USP17L3A6NCW0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP17L3A6NCW0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP17L3A6NCW0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
USP17L3A6NCW0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
USP17L3A6NCW0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP17L3A6NCW0 AL353743.1-202ENST00000431724 1695 ntBASIC4.97□□□□□ -1.61
USP17L3A6NCW0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.97□□□□□ -1.61
USP17L3A6NCW0 Y_RNA.16-201ENST00000362421 102 ntBASIC4.97□□□□□ -1.61
USP17L3A6NCW0 SNORD113-8-201ENST00000363497 74 ntBASIC4.97□□□□□ -1.61
USP17L3A6NCW0 RNA5SP387-201ENST00000364226 106 ntBASIC4.97□□□□□ -1.61
USP17L3A6NCW0 Y_RNA.277-201ENST00000364754 102 ntBASIC4.97□□□□□ -1.61
USP17L3A6NCW0 RNU6-843P-201ENST00000384454 104 ntBASIC4.97□□□□□ -1.61
USP17L3A6NCW0 Y_RNA.541-201ENST00000384640 113 ntBASIC4.97□□□□□ -1.61
USP17L3A6NCW0 MIR518D-201ENST00000385014 87 ntBASIC4.97□□□□□ -1.61
USP17L3A6NCW0 MIR153-2-201ENST00000385225 87 ntBASIC4.97□□□□□ -1.61
USP17L3A6NCW0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.97□□□□□ -1.61
USP17L3A6NCW0 AL445305.1-201ENST00000432577 575 ntBASIC4.97□□□□□ -1.61
USP17L3A6NCW0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.97□□□□□ -1.61
USP17L3A6NCW0 AC023141.12-201ENST00000512399 199 ntBASIC4.97□□□□□ -1.61
USP17L3A6NCW0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USP17L3A6NCW0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms