Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC005086.4-201ENST00000623065 213 ntBASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 RNA5SP252-201ENST00000391131 119 ntBASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 AL353997.1-201ENST00000432936 108 ntBASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 AC068781.1-201ENST00000488231 618 ntBASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 AC116655.1-201ENST00000508324 901 ntBASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 RN7SKP18-201ENST00000516005 275 ntBASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 AC005476.1-201ENST00000554427 397 ntBASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 AC021739.1-201ENST00000559631 174 ntBASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 CPDP1-201ENST00000579660 283 ntBASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 AC016925.2-201ENST00000605108 242 ntBASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 AC233263.6-201ENST00000631132 1963 ntBASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC163A0A0D9SF12 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 SNORA14A-201ENST00000364773 135 ntBASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 RNU1-100P-201ENST00000365255 165 ntBASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 U8.8-201ENST00000365399 135 ntBASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 SNORA22B-201ENST00000383876 138 ntBASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 FTH1P15-201ENST00000406984 280 ntBASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 MIR1251-201ENST00000408552 70 ntBASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 AC114801.2-201ENST00000503825 781 ntBASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 RNU6-976P-201ENST00000516086 111 ntBASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 SCARNA14-201ENST00000516903 136 ntBASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 RNU6-699P-201ENST00000517081 110 ntBASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 AC110491.1-201ENST00000562191 2010 ntBASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 AC024153.1-201ENST00000603103 365 ntBASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 PART1_1.1-201ENST00000611761 217 ntBASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC163A0A0D9SF12 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC163A0A0D9SF12 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CCDC163A0A0D9SF12 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC163A0A0D9SF12 AC110774.1-201ENST00000623567 2018 ntBASIC3.9□□□□□ -1.78
CCDC163A0A0D9SF12 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
CCDC163A0A0D9SF12 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC163A0A0D9SF12 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 SNORD56.1-201ENST00000362913 68 ntBASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 Y_RNA.395-201ENST00000383945 109 ntBASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 MIR634-201ENST00000385208 97 ntBASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 snosnR66.1-201ENST00000391095 99 ntBASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 RN7SKP167-201ENST00000411047 285 ntBASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 RNU6-55P-201ENST00000411092 107 ntBASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 RNU6-1245P-201ENST00000411130 106 ntBASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 AC083863.1-201ENST00000438811 231 ntBASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 HMGN2P10-201ENST00000448085 265 ntBASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 NIPA2P5-201ENST00000452282 464 ntBASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 SNRPGP7-201ENST00000469016 106 ntBASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 SNORA31.18-201ENST00000517043 134 ntBASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 RNU6-988P-201ENST00000519081 107 ntBASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms