Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHGA9Q9Y5G4 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.6□□□□□ -1.83
PCDHGA9Q9Y5G4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.6□□□□□ -1.83
PCDHGA9Q9Y5G4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGA9Q9Y5G4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHGA9Q9Y5G4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 RNU6-78P-201ENST00000362897 107 ntBASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 RNU6-827P-201ENST00000365553 106 ntBASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 RNA5SP252-201ENST00000391131 119 ntBASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 AC096649.2-201ENST00000416186 393 ntBASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 AL117339.3-201ENST00000418733 162 ntBASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 AL590632.1-201ENST00000424289 371 ntBASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 HMGN2P31-201ENST00000432430 273 ntBASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 RPS15AP5-201ENST00000436276 388 ntBASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 HIGD1AP11-201ENST00000438361 280 ntBASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 AL441985.1-201ENST00000457727 251 ntBASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 SNORD19B-201ENST00000459623 84 ntBASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 RN7SL330P-201ENST00000469709 307 ntBASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 MTND4P17-201ENST00000470444 350 ntBASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 AC116655.1-201ENST00000508324 901 ntBASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 AL161423.1-201ENST00000613700 262 ntBASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 AC073346.2-201ENST00000624724 2058 ntBASIC3.59□□□□□ -1.83
PCDHGA9Q9Y5G4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.59□□□□□ -1.84
PCDHGA9Q9Y5G4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHGA9Q9Y5G4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHGA9Q9Y5G4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 Y_RNA.259-201ENST00000364619 101 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 SNORA14A-201ENST00000364773 135 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU1-100P-201ENST00000365255 165 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 MIR183-201ENST00000384958 110 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-1245P-201ENST00000411130 106 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 Z99755.1-201ENST00000414048 380 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 RPS29P4-201ENST00000414733 161 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 AL035423.1-201ENST00000420331 213 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 AC005300.1-201ENST00000428401 373 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 AL591043.1-201ENST00000432461 424 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 AC083863.1-201ENST00000438811 231 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 U3.44-201ENST00000458938 192 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 RN7SL93P-201ENST00000463035 293 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-307P-201ENST00000516743 106 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 Y_RNA.708-201ENST00000516950 96 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 AC006199.1-201ENST00000548728 219 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 MIR3186-201ENST00000577404 85 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 AL121917.1-203ENST00000605534 577 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 AC098657.3-201ENST00000620434 263 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 MIR3529-201ENST00000637713 78 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 AC008669.1-201ENST00000565823 2178 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 HAUS6P2-201ENST00000433254 2404 ntBASIC3.58□□□□□ -1.84
PCDHGA9Q9Y5G4 RPL9P7-201ENST00000330965 580 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 Y_RNA.58-201ENST00000362807 102 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-527P-201ENST00000363425 104 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 Y_RNA.154-201ENST00000363624 102 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-694P-201ENST00000364071 147 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 RNY3P1-201ENST00000365085 102 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 RNY3-201ENST00000365484 102 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 Y_RNA.490-201ENST00000384413 102 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-790P-201ENST00000384479 105 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 HMGN2P8-201ENST00000391458 268 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 RPS29P13-201ENST00000402041 169 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-370P-201ENST00000411008 104 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 AC097713.2-201ENST00000430199 356 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 AL513043.1-201ENST00000439124 535 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 IPO8P1-201ENST00000455509 3109 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 AL031183.1-201ENST00000457667 207 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 SNORD5.1-201ENST00000458800 75 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 RPL9P9-202ENST00000466501 579 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 AC106707.2-201ENST00000484182 374 ntBASIC3.57□□□□□ -1.84
PCDHGA9Q9Y5G4 AC018437.1-201ENST00000492214 406 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms