Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 SNORA4.4-201ENST00000515921 135 ntBASIC2.18□□□□□ -2.06
CTNNA3Q9UI47 RNA5SP137-201ENST00000516833 135 ntBASIC2.18□□□□□ -2.06
CTNNA3Q9UI47 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.18□□□□□ -2.06
CTNNA3Q9UI47 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.18□□□□□ -2.06
CTNNA3Q9UI47 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.18□□□□□ -2.06
CTNNA3Q9UI47 MIR544B-201ENST00000582372 78 ntBASIC2.18□□□□□ -2.06
CTNNA3Q9UI47 AC022202.1-201ENST00000613515 211 ntBASIC2.18□□□□□ -2.06
CTNNA3Q9UI47 AC005296.1-201ENST00000616145 209 ntBASIC2.18□□□□□ -2.06
CTNNA3Q9UI47 AL512643.1-201ENST00000635735 524 ntBASIC2.18□□□□□ -2.06
CTNNA3Q9UI47 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CTNNA3Q9UI47 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
CTNNA3Q9UI47 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 ZNF29P-201ENST00000225587 168 ntBASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 RNU5A-8P-201ENST00000364102 114 ntBASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 RNU6-1280P-201ENST00000365211 107 ntBASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 NDUFS5P1-201ENST00000405668 289 ntBASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 AC096920.1-201ENST00000423991 241 ntBASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 AL136380.1-201ENST00000447970 162 ntBASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 AL009048.1-201ENST00000450437 298 ntBASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 AC112771.1-201ENST00000463581 102 ntBASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 AC104564.1-201ENST00000493028 407 ntBASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 RPF2P2-201ENST00000504693 896 ntBASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 DEFB108A-201ENST00000530110 222 ntBASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 OR4G3P-201ENST00000633500 913 ntBASIC2.17□□□□□ -2.06
CTNNA3Q9UI47 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 Y_RNA.269-201ENST00000364685 89 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 U3.13-201ENST00000364804 214 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 AL353621.1-201ENST00000418219 243 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 RPL23AP35-201ENST00000451906 501 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 RPL23AP3-201ENST00000453844 468 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 ACA59.2-201ENST00000517061 156 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 RNU6-64P-201ENST00000517119 105 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 AK6P1-201ENST00000540219 478 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 MIR4299-201ENST00000577899 72 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 MIR4782-201ENST00000577987 79 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 AC243960.4-201ENST00000600532 288 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 AL109918.3-201ENST00000603072 338 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 AC009974.1-201ENST00000608881 455 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 AC108479.2-201ENST00000617314 601 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 AL356596.1-201ENST00000624230 379 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 AC017037.3-201ENST00000625016 472 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 AC106754.1-201ENST00000562632 1513 ntBASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CTNNA3Q9UI47 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 RNY1P10-201ENST00000363268 113 ntBASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 U8.14-201ENST00000390843 143 ntBASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 RNU6-278P-201ENST00000390945 109 ntBASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 MIR1294-201ENST00000408503 142 ntBASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 RNU6-584P-201ENST00000410350 95 ntBASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 RPL7P34-201ENST00000433316 712 ntBASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 AL117351.1-201ENST00000438864 766 ntBASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 CR769776.1-201ENST00000441254 787 ntBASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 RPL23AP6-201ENST00000446637 472 ntBASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 AC117503.1-201ENST00000472241 394 ntBASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 AC011005.2-201ENST00000487324 359 ntBASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 MTCYBP43-201ENST00000513621 740 ntBASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 RNU6-143P-201ENST00000516942 93 ntBASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 AC092125.1-201ENST00000562568 1995 ntBASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.15□□□□□ -2.07
CTNNA3Q9UI47 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 SNORD113-6-201ENST00000363345 75 ntBASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 MIR561-201ENST00000385216 97 ntBASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 AL356432.1-201ENST00000405809 419 ntBASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 AC003989.2-201ENST00000440224 169 ntBASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms