Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 AL356280.1-201ENST00000603614 379 ntBASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 AC008945.2-201ENST00000606056 604 ntBASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 MIR92B-201ENST00000607575 96 ntBASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 AC131280.1-202ENST00000624067 4211 ntBASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.78□□□□□ -1.97
CPSF2Q9P2I0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 MIR422A-201ENST00000362286 90 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 RNU5A-6P-201ENST00000384136 116 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 RNU6-72P-201ENST00000384285 79 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 U3.37-201ENST00000408528 213 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 RNU2-66P-201ENST00000410650 161 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 AL353621.1-201ENST00000418219 243 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 MTCO3P30-201ENST00000426425 670 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 MICF-203ENST00000432679 129 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 MTND1P18-201ENST00000448191 573 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 AL139109.1-201ENST00000455491 297 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 AL356010.1-201ENST00000456364 102 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 snoU109.2-201ENST00000459316 135 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 MRPL42P6-201ENST00000486397 371 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 AC011005.2-201ENST00000487324 359 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 AC091826.1-201ENST00000514065 313 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 SNORA9.3-201ENST00000516383 129 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 AC109329.2-201ENST00000519658 482 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 AC135279.1-201ENST00000543493 504 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 AC024909.2-201ENST00000553035 286 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 MIR3199-1-201ENST00000582434 88 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 ZNF861P-201ENST00000588126 639 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 AC091805.2-201ENST00000603848 235 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 ATP1B3P1-201ENST00000605365 821 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 NDUFA8P1-201ENST00000605525 367 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 AC008536.2-201ENST00000607284 349 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 ATP5A1P2-202ENST00000616464 443 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 RMST_4.1-201ENST00000616886 107 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 AL109809.4-201ENST00000603520 2185 ntBASIC2.77□□□□□ -1.97
CPSF2Q9P2I0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 AL359854.1-201ENST00000614203 1594 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 AL139276.1-201ENST00000311910 1001 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 RNU6-715P-201ENST00000365204 103 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 MIR34A-201ENST00000385130 110 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 MIR524-201ENST00000385242 87 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 RPS4XP8-201ENST00000402039 771 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 Z98742.2-201ENST00000431564 187 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 AC002486.1-201ENST00000435098 391 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 MRPL50P4-201ENST00000446432 475 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 HMGB1P30-201ENST00000492455 606 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 MTCO3P9-201ENST00000506989 781 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 MTND3P25-201ENST00000509243 135 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 MTCO3P7-201ENST00000510008 774 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 MIR892C-201ENST00000516410 77 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 OR5AQ1P-201ENST00000527596 927 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 FAM92A1P1-201ENST00000528023 890 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 MIR3616-201ENST00000584070 92 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 MIR4765-201ENST00000585007 77 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 AC008752.3-201ENST00000588113 712 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 YPEL5P2-201ENST00000605553 359 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 AC004908.3-201ENST00000610248 625 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 Z99129.1-201ENST00000612510 255 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 AC093783.1-201ENST00000612976 329 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 uc_338.11-201ENST00000619132 160 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 AC138627.2-201ENST00000624202 601 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 MTND5P30-201ENST00000452896 1731 ntBASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CPSF2Q9P2I0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CPSF2Q9P2I0 Y_RNA.1-201ENST00000352915 104 ntBASIC2.75□□□□□ -1.97
CPSF2Q9P2I0 RNU6-942P-201ENST00000363002 107 ntBASIC2.75□□□□□ -1.97
CPSF2Q9P2I0 RNU4-24P-201ENST00000364565 139 ntBASIC2.75□□□□□ -1.97
CPSF2Q9P2I0 RNU6-45P-201ENST00000384471 107 ntBASIC2.75□□□□□ -1.97
CPSF2Q9P2I0 Y_RNA.559-201ENST00000384686 107 ntBASIC2.75□□□□□ -1.97
CPSF2Q9P2I0 SNORA80E-201ENST00000384744 137 ntBASIC2.75□□□□□ -1.97
CPSF2Q9P2I0 AL138885.1-201ENST00000405921 675 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms