Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 RNA5SP118-201ENST00000410385 109 ntBASIC4.42□□□□□ -1.7
USP35Q9P2H5 BX682237.1-201ENST00000415016 335 ntBASIC4.42□□□□□ -1.7
USP35Q9P2H5 AC009414.1-201ENST00000427200 443 ntBASIC4.42□□□□□ -1.7
USP35Q9P2H5 TOMM20P4-201ENST00000427861 435 ntBASIC4.42□□□□□ -1.7
USP35Q9P2H5 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.42□□□□□ -1.7
USP35Q9P2H5 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.42□□□□□ -1.7
USP35Q9P2H5 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.42□□□□□ -1.7
USP35Q9P2H5 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.42□□□□□ -1.7
USP35Q9P2H5 AC104027.1-201ENST00000521887 300 ntBASIC4.42□□□□□ -1.7
USP35Q9P2H5 AC090115.3-201ENST00000553218 849 ntBASIC4.42□□□□□ -1.7
USP35Q9P2H5 AC007151.1-201ENST00000572774 483 ntBASIC4.42□□□□□ -1.7
USP35Q9P2H5 AC007014.2-201ENST00000615581 479 ntBASIC4.42□□□□□ -1.7
USP35Q9P2H5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.42□□□□□ -1.7
USP35Q9P2H5 AL356321.1-201ENST00000621360 228 ntBASIC4.42□□□□□ -1.7
USP35Q9P2H5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
USP35Q9P2H5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.42□□□□□ -1.7
USP35Q9P2H5 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.42□□□□□ -1.7
USP35Q9P2H5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP35Q9P2H5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
USP35Q9P2H5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.41□□□□□ -1.7
USP35Q9P2H5 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.41□□□□□ -1.7
USP35Q9P2H5 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USP35Q9P2H5 MIR148B-201ENST00000362252 99 ntBASIC4.41□□□□□ -1.7
USP35Q9P2H5 Y_RNA.295-201ENST00000364918 102 ntBASIC4.41□□□□□ -1.7
USP35Q9P2H5 RNU6-72P-201ENST00000384285 79 ntBASIC4.41□□□□□ -1.7
USP35Q9P2H5 RNU6-373P-201ENST00000411247 98 ntBASIC4.41□□□□□ -1.7
USP35Q9P2H5 RPL7P10-201ENST00000417407 739 ntBASIC4.41□□□□□ -1.7
USP35Q9P2H5 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.41□□□□□ -1.7
USP35Q9P2H5 SRIP2-201ENST00000428470 166 ntBASIC4.41□□□□□ -1.7
USP35Q9P2H5 AL161651.1-201ENST00000440882 223 ntBASIC4.41□□□□□ -1.7
USP35Q9P2H5 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.41□□□□□ -1.7
USP35Q9P2H5 RPL21P99-201ENST00000480369 423 ntBASIC4.41□□□□□ -1.7
USP35Q9P2H5 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.41□□□□□ -1.7
USP35Q9P2H5 AC006483.1-201ENST00000487308 313 ntBASIC4.41□□□□□ -1.7
USP35Q9P2H5 Y_RNA.654-201ENST00000497848 106 ntBASIC4.41□□□□□ -1.7
USP35Q9P2H5 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.41□□□□□ -1.7
USP35Q9P2H5 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.41□□□□□ -1.7
USP35Q9P2H5 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.41□□□□□ -1.7
USP35Q9P2H5 AC010486.1-201ENST00000511793 424 ntBASIC4.41□□□□□ -1.7
USP35Q9P2H5 AL121821.2-201ENST00000556081 394 ntBASIC4.41□□□□□ -1.7
USP35Q9P2H5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.41□□□□□ -1.7
USP35Q9P2H5 AL355877.2-201ENST00000603670 358 ntBASIC4.41□□□□□ -1.7
USP35Q9P2H5 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.41□□□□□ -1.7
USP35Q9P2H5 AL160394.1-201ENST00000624765 724 ntBASIC4.41□□□□□ -1.7
USP35Q9P2H5 SNORA50A-202ENST00000629536 136 ntBASIC4.41□□□□□ -1.7
USP35Q9P2H5 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP35Q9P2H5 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
USP35Q9P2H5 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
USP35Q9P2H5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
USP35Q9P2H5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
USP35Q9P2H5 RNA5SP432-201ENST00000362480 116 ntBASIC4.4□□□□□ -1.71
USP35Q9P2H5 RPS4XP7-201ENST00000406274 780 ntBASIC4.4□□□□□ -1.71
USP35Q9P2H5 OR9R1P-201ENST00000412200 877 ntBASIC4.4□□□□□ -1.71
USP35Q9P2H5 Z99755.1-201ENST00000414048 380 ntBASIC4.4□□□□□ -1.71
USP35Q9P2H5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.4□□□□□ -1.71
USP35Q9P2H5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.4□□□□□ -1.71
USP35Q9P2H5 ERLEC1P1-201ENST00000433806 578 ntBASIC4.4□□□□□ -1.71
USP35Q9P2H5 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.4□□□□□ -1.71
USP35Q9P2H5 AC009969.1-201ENST00000438726 172 ntBASIC4.4□□□□□ -1.71
USP35Q9P2H5 DYNLL1P5-201ENST00000467158 270 ntBASIC4.4□□□□□ -1.71
USP35Q9P2H5 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.4□□□□□ -1.71
USP35Q9P2H5 RPS29P25-201ENST00000481709 171 ntBASIC4.4□□□□□ -1.71
USP35Q9P2H5 SNORA64.4-201ENST00000516632 81 ntBASIC4.4□□□□□ -1.71
USP35Q9P2H5 CYCSP27-201ENST00000527643 293 ntBASIC4.4□□□□□ -1.71
USP35Q9P2H5 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.4□□□□□ -1.71
USP35Q9P2H5 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.4□□□□□ -1.71
USP35Q9P2H5 AC104984.5-201ENST00000586878 94 ntBASIC4.4□□□□□ -1.71
USP35Q9P2H5 RPL23AP78-201ENST00000599928 470 ntBASIC4.4□□□□□ -1.71
USP35Q9P2H5 AC073657.2-201ENST00000605661 303 ntBASIC4.4□□□□□ -1.71
USP35Q9P2H5 AC103705.1-201ENST00000619013 241 ntBASIC4.4□□□□□ -1.71
USP35Q9P2H5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
USP35Q9P2H5 AC068647.1-201ENST00000489539 2265 ntBASIC4.4□□□□□ -1.71
USP35Q9P2H5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USP35Q9P2H5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.39□□□□□ -1.71
USP35Q9P2H5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.39□□□□□ -1.71
USP35Q9P2H5 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
USP35Q9P2H5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.39□□□□□ -1.71
USP35Q9P2H5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.39□□□□□ -1.71
USP35Q9P2H5 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.39□□□□□ -1.71
USP35Q9P2H5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.39□□□□□ -1.71
USP35Q9P2H5 AL121601.2-201ENST00000438019 707 ntBASIC4.39□□□□□ -1.71
USP35Q9P2H5 RNU6-1208P-201ENST00000459588 107 ntBASIC4.39□□□□□ -1.71
USP35Q9P2H5 RPL21P93-201ENST00000480465 489 ntBASIC4.39□□□□□ -1.71
USP35Q9P2H5 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
USP35Q9P2H5 AC008885.1-201ENST00000514930 301 ntBASIC4.39□□□□□ -1.71
USP35Q9P2H5 RNU6-189P-201ENST00000516120 101 ntBASIC4.39□□□□□ -1.71
USP35Q9P2H5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.39□□□□□ -1.71
USP35Q9P2H5 AP004607.1-201ENST00000524456 203 ntBASIC4.39□□□□□ -1.71
USP35Q9P2H5 AP002404.1-201ENST00000532005 451 ntBASIC4.39□□□□□ -1.71
USP35Q9P2H5 AC078814.3-201ENST00000553036 491 ntBASIC4.39□□□□□ -1.71
USP35Q9P2H5 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.39□□□□□ -1.71
USP35Q9P2H5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.39□□□□□ -1.71
USP35Q9P2H5 AC010525.2-201ENST00000590920 195 ntBASIC4.39□□□□□ -1.71
USP35Q9P2H5 AL391813.1-201ENST00000603098 260 ntBASIC4.39□□□□□ -1.71
USP35Q9P2H5 RNU6-89P-201ENST00000606519 100 ntBASIC4.39□□□□□ -1.71
USP35Q9P2H5 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
USP35Q9P2H5 UCA1.1-201ENST00000620952 75 ntBASIC4.39□□□□□ -1.71
USP35Q9P2H5 AC022149.2-201ENST00000621061 203 ntBASIC4.39□□□□□ -1.71
USP35Q9P2H5 AC002064.3-201ENST00000623448 346 ntBASIC4.39□□□□□ -1.71
USP35Q9P2H5 AC018692.3-201ENST00000623929 123 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms