Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL732372.2-207ENST00000445840 183 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.57□□□□□ -2
NDE1Q9NXR1 FGF7P6-202ENST00000451282 293 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.57□□□□□ -2
NDE1Q9NXR1 SEPT14P2-201ENST00000453405 183 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.57□□□□□ -2
NDE1Q9NXR1 RPL12P25-201ENST00000455592 494 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 RNU6-261P-201ENST00000459506 102 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 RPL39P36-201ENST00000490784 156 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 EIF4EP3-201ENST00000498782 656 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.57□□□□□ -2
NDE1Q9NXR1 SEPT14P4-201ENST00000513445 186 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 AC105417.1-201ENST00000514691 285 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 RNU6-685P-201ENST00000517088 95 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 RN7SKP57-201ENST00000517248 293 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 FO082796.1-201ENST00000523795 183 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 SUB1P1-201ENST00000524415 382 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 ATP5F1P5-201ENST00000526403 760 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 SNORA59B-202ENST00000578183 701 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 AP001094.1-201ENST00000579805 193 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 MIR4801-201ENST00000582704 82 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 MIR4635-201ENST00000583759 79 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.57□□□□□ -2
NDE1Q9NXR1 RPL23AP78-201ENST00000599928 470 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 AC024153.1-201ENST00000603103 365 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 RPL12P50-201ENST00000603116 116 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 AL137843.1-201ENST00000605078 385 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 AL359547.2-201ENST00000615810 418 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 MIR6076-201ENST00000617521 113 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 FER-210ENST00000628534 558 ntTSL 5 BASIC2.57□□□□□ -2
NDE1Q9NXR1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.57□□□□□ -2
NDE1Q9NXR1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.57□□□□□ -2
NDE1Q9NXR1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NDE1Q9NXR1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.56□□□□□ -2
NDE1Q9NXR1 AL049641.1-201ENST00000441055 1948 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.56□□□□□ -2
NDE1Q9NXR1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
NDE1Q9NXR1 NACAP2-201ENST00000318548 624 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 RNU6-451P-201ENST00000362921 107 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 RNU4-20P-201ENST00000365601 151 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 RPS4XP3-201ENST00000398541 413 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 OR9R1P-201ENST00000412200 877 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.56□□□□□ -2
NDE1Q9NXR1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.56□□□□□ -2
NDE1Q9NXR1 AL158156.1-201ENST00000422509 473 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 AL160275.3-201ENST00000423876 471 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.56□□□□□ -2
NDE1Q9NXR1 GPM6BP2-201ENST00000432046 144 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 RPL36AP53-201ENST00000432891 316 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.56□□□□□ -2
NDE1Q9NXR1 RBMX2P4-201ENST00000441256 376 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.56□□□□□ -2
NDE1Q9NXR1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.56□□□□□ -2
NDE1Q9NXR1 GPM6BP1-201ENST00000446387 144 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 DPPA3P1-201ENST00000448050 469 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.56□□□□□ -2
NDE1Q9NXR1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.56□□□□□ -2
NDE1Q9NXR1 BX510359.1-201ENST00000456973 237 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.56□□□□□ -2
NDE1Q9NXR1 RPL30P14-201ENST00000482744 348 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 MTAPP1-201ENST00000489154 819 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 AC139453.3-201ENST00000493276 369 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 AC109927.2-201ENST00000506416 303 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 AC006445.2-201ENST00000510061 472 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 SNORA31.11-201ENST00000516528 139 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 RNA5SP291-201ENST00000517222 105 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 AC009812.2-201ENST00000517657 457 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.56□□□□□ -2
NDE1Q9NXR1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.56□□□□□ -2
NDE1Q9NXR1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.56□□□□□ -2
NDE1Q9NXR1 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.56□□□□□ -2
NDE1Q9NXR1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.56□□□□□ -2
NDE1Q9NXR1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.56□□□□□ -2
NDE1Q9NXR1 AC234778.2-201ENST00000566241 354 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 AC009163.5-201ENST00000575421 637 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 MIR4446-201ENST00000578505 67 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 MIR4298-201ENST00000584380 73 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 BNIP3P9-201ENST00000603714 553 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 AC136601.2-201ENST00000604356 474 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 HSPE1P7-201ENST00000604681 321 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 AC004805.2-201ENST00000605382 482 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 AC104458.1-201ENST00000608243 463 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 RMST_3.1-201ENST00000611651 109 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 AP001486.3-201ENST00000615334 372 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.56□□□□□ -2
NDE1Q9NXR1 MIR3662-201ENST00000637030 95 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 AC024614.3-201ENST00000637860 256 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.56□□□□□ -2
NDE1Q9NXR1 TPTE2P4-201ENST00000258589 1605 ntBASIC2.56□□□□□ -2
NDE1Q9NXR1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NDE1Q9NXR1 FTLP6-201ENST00000355274 422 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 RNY3P3-201ENST00000363816 102 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 RNU6-270P-201ENST00000364131 105 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 RNA5SP139-201ENST00000364340 117 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NDE1Q9NXR1 RNU6-877P-201ENST00000383868 107 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 RNU6-140P-201ENST00000384566 108 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 AL606923.1-201ENST00000406616 190 ntBASIC2.55□□□□□ -2
NDE1Q9NXR1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms