Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 RPL23AP30-201ENST00000432419 501 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 RPL23AP3-201ENST00000453844 468 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.72□□□□□ -2.13
CLN6Q9NWW5 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.72□□□□□ -2.13
CLN6Q9NWW5 MTAPP1-201ENST00000489154 819 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 HMGB1P35-201ENST00000503360 598 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 RNU6-311P-201ENST00000516224 102 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 RNU7-51P-201ENST00000516560 62 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 AC034114.1-201ENST00000520293 285 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 MTND4LP18-201ENST00000526864 291 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.72□□□□□ -2.13
CLN6Q9NWW5 RANP3-201ENST00000530970 276 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.72□□□□□ -2.13
CLN6Q9NWW5 AC092325.1-201ENST00000566449 554 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 AC025678.1-201ENST00000567861 338 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 MIR3122-201ENST00000577243 73 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CLN6Q9NWW5 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.72□□□□□ -2.13
CLN6Q9NWW5 AC073410.2-201ENST00000603240 332 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.72□□□□□ -2.13
CLN6Q9NWW5 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.72□□□□□ -2.13
CLN6Q9NWW5 AC024940.5-201ENST00000622889 474 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.72□□□□□ -2.13
CLN6Q9NWW5 MIR219B-201ENST00000637023 88 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 ZNF702P-202ENST00000434269 1966 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 RBBP8P1-201ENST00000449447 1844 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 RNU5E-1-201ENST00000362477 120 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 RNA5SP276-201ENST00000362580 94 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 RNU1-23P-201ENST00000363361 144 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 RNU1-57P-201ENST00000384491 166 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CLN6Q9NWW5 RNU2-20P-201ENST00000410425 191 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 AL030996.1-201ENST00000411430 235 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 XKRYP1-201ENST00000423438 492 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 AC096920.1-201ENST00000423991 241 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 XKRYP2-201ENST00000432915 492 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.71□□□□□ -2.14
CLN6Q9NWW5 AL354941.1-201ENST00000438600 464 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.71□□□□□ -2.14
CLN6Q9NWW5 AC118469.1-201ENST00000442943 488 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.71□□□□□ -2.14
CLN6Q9NWW5 MTND1P12-201ENST00000455231 147 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.71□□□□□ -2.14
CLN6Q9NWW5 RPL23AP42-201ENST00000471152 471 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 AC007182.2-201ENST00000489251 402 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.71□□□□□ -2.14
CLN6Q9NWW5 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.71□□□□□ -2.14
CLN6Q9NWW5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.71□□□□□ -2.14
CLN6Q9NWW5 OR5AQ1P-201ENST00000527596 927 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 AC026271.5-201ENST00000577873 130 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
CLN6Q9NWW5 BNIP3P30-201ENST00000601184 574 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 AP000811.1-201ENST00000603803 651 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 AC012493.3-201ENST00000604494 112 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 AP002782.1-201ENST00000623107 614 ntBASIC1.71□□□□□ -2.14
CLN6Q9NWW5 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.71□□□□□ -2.14
CLN6Q9NWW5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CLN6Q9NWW5 AL391994.1-201ENST00000254724 282 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 SNORA75B-201ENST00000384053 137 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 SNORA40.19-201ENST00000390846 128 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 RN7SKP32-201ENST00000410167 303 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.7□□□□□ -2.14
CLN6Q9NWW5 AL135786.1-201ENST00000415892 214 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.7□□□□□ -2.14
CLN6Q9NWW5 AL365338.1-201ENST00000422282 858 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.7□□□□□ -2.14
CLN6Q9NWW5 AL445646.1-201ENST00000431784 216 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.7□□□□□ -2.14
CLN6Q9NWW5 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.7□□□□□ -2.14
CLN6Q9NWW5 AL353689.1-201ENST00000438895 199 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 DNAJC19P4-201ENST00000440115 345 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.7□□□□□ -2.14
CLN6Q9NWW5 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.7□□□□□ -2.14
CLN6Q9NWW5 KATNBL1P6-201ENST00000453433 915 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.7□□□□□ -2.14
CLN6Q9NWW5 AC018868.1-201ENST00000491307 315 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 AC112204.1-201ENST00000502591 103 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 AC034244.1-201ENST00000507687 207 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.7□□□□□ -2.14
CLN6Q9NWW5 RNU6-586P-201ENST00000517265 104 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.7□□□□□ -2.14
CLN6Q9NWW5 AC135279.1-201ENST00000543493 504 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 ZNF519P3-201ENST00000557158 1032 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 TMF1P1-201ENST00000576058 373 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 MIR1273D-201ENST00000577266 86 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 MIR4999-201ENST00000585029 91 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 SNRPGP19-201ENST00000603826 189 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 AC005034.5-201ENST00000604219 466 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 TUSC7.1-201ENST00000610969 165 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.7□□□□□ -2.14
CLN6Q9NWW5 MIR3529-201ENST00000637713 78 ntBASIC1.7□□□□□ -2.14
CLN6Q9NWW5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CLN6Q9NWW5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.7□□□□□ -2.14
CLN6Q9NWW5 SNORA64-201ENST00000384674 134 ntBASIC1.69□□□□□ -2.14
CLN6Q9NWW5 GSTA9P-201ENST00000406231 611 ntBASIC1.69□□□□□ -2.14
CLN6Q9NWW5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.69□□□□□ -2.14
CLN6Q9NWW5 Y_RNA.623-201ENST00000411128 95 ntBASIC1.69□□□□□ -2.14
CLN6Q9NWW5 RPL23AP39-201ENST00000415533 405 ntBASIC1.69□□□□□ -2.14
CLN6Q9NWW5 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms