Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 SRP72P2-201ENST00000344851 1979 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 Y_RNA.166-201ENST00000363730 102 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 Y_RNA.414-201ENST00000384011 101 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 SNORA75B-201ENST00000384053 137 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 SNORD67-201ENST00000390833 111 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 SNORA40C-201ENST00000391285 128 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 MIR888-201ENST00000401186 77 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 RN7SKP32-201ENST00000410167 303 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 MTND3P8-201ENST00000412909 339 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 HSPE1P1-201ENST00000421494 318 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 HMGN2P30-201ENST00000423237 256 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 TRBVA-201ENST00000498804 316 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 AC008885.1-201ENST00000514930 301 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 RNU4-49P-201ENST00000516080 140 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 SNORA31.19-201ENST00000517079 126 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 MIR4719-201ENST00000585233 84 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 AL117336.2-201ENST00000602435 335 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 AL353621.2-201ENST00000605340 133 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 CTHRC1P1-201ENST00000605383 469 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 AL138880.2-201ENST00000616214 239 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 AC073308.1-201ENST00000623696 305 ntBASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.16□□□□□ -1.9
TMEM248Q9NWD8 MTND4P29-201ENST00000503122 1372 ntBASIC3.15□□□□□ -1.9
TMEM248Q9NWD8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
TMEM248Q9NWD8 Y_RNA.61-201ENST00000362835 102 ntBASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 RNU6-1303P-201ENST00000364841 107 ntBASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 RNU6-1013P-201ENST00000384180 107 ntBASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 SNORA54-201ENST00000384281 123 ntBASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 RN7SKP220-201ENST00000410611 288 ntBASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 AC098614.2-201ENST00000426040 255 ntBASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 AC007560.1-201ENST00000426912 237 ntBASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 TRIAP1P1-201ENST00000427062 225 ntBASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 RPS3AP12-201ENST00000443616 753 ntBASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 NDUFB1P2-201ENST00000449477 176 ntBASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 MIR892C-201ENST00000516410 77 ntBASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 RNU6-572P-201ENST00000516724 80 ntBASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 RMST_4.1-201ENST00000616886 107 ntBASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 U6.99-201ENST00000637524 83 ntBASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TMEM248Q9NWD8 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 AC073325.2-201ENST00000339545 159 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 U3.6-201ENST00000363622 211 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 RNU6-270P-201ENST00000364131 105 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 RNU6-266P-201ENST00000364225 107 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 Y_RNA.813-201ENST00000364639 102 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 SNORA9-201ENST00000384215 133 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 RNU6-831P-201ENST00000384548 107 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 RNA5SP293-201ENST00000410527 113 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 Y_RNA.623-201ENST00000411128 95 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 RPL26P27-201ENST00000414397 437 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 AC099548.1-201ENST00000421443 426 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 AL627311.1-201ENST00000431514 115 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 AL365400.1-201ENST00000431854 640 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 MTND4LP16-201ENST00000440828 295 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 AL078601.1-201ENST00000444542 271 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 AC125238.1-201ENST00000448842 249 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 RPL37P4-201ENST00000448908 268 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 AL583843.1-201ENST00000456070 346 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 RNU7-66P-201ENST00000459469 62 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 RNU6-329P-201ENST00000459618 107 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 AC011005.2-201ENST00000487324 359 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 RNU1-86P-201ENST00000516108 154 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 RNU1-103P-201ENST00000516502 125 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 RNU1-107P-201ENST00000516617 154 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 RNU6-703P-201ENST00000516946 107 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 SNORA70.24-201ENST00000517233 118 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 AC069113.1-201ENST00000517763 267 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 CBX3P7-201ENST00000532876 502 ntBASIC3.14□□□□□ -1.91
TMEM248Q9NWD8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms