Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 MIR454-201ENST00000390180 115 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 RPS4XP8-201ENST00000402039 771 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 MTCO3P41-201ENST00000414801 328 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 AC009296.1-201ENST00000443146 155 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 AC132479.1-201ENST00000449160 144 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 NDUFB1P2-201ENST00000449477 176 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 AP000705.1-201ENST00000454567 350 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 AC027673.1-201ENST00000456245 405 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 TBCAP3-201ENST00000512475 312 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 SCARNA17.1-201ENST00000516211 143 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 SCARNA17.2-201ENST00000516334 143 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 SNORA31.15-201ENST00000516771 132 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 MTCYBP20-201ENST00000524239 1129 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 AC022880.1-201ENST00000534017 973 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 MIR3670-2-201ENST00000582974 65 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 MIR3670-1-201ENST00000584160 65 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 MIR3670-3-201ENST00000584855 65 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 Z84480.1-201ENST00000605131 311 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 AL158032.1-201ENST00000605401 106 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 MIR3670-4-201ENST00000612260 65 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 SCARNA17.4-201ENST00000614296 143 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 MIR412-201ENST00000362142 91 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 MIR518D-201ENST00000385014 87 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 FO393413.1-201ENST00000402892 195 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 RNU2-16P-201ENST00000410712 136 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 AL031779.1-201ENST00000415663 330 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 RPL23AP45-201ENST00000476406 468 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 EIF4EP3-201ENST00000498782 656 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 AC091435.1-201ENST00000505442 584 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 RANP3-201ENST00000530970 276 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 AL121821.2-201ENST00000556081 394 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 AL391840.1-201ENST00000571144 367 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 MIR3616-201ENST00000584070 92 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 MIR548AC-201ENST00000585049 88 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 OR1M4P-201ENST00000589199 287 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 AC005261.5-201ENST00000596280 355 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 AC073648.5-201ENST00000603502 305 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 NDUFA8P1-201ENST00000605525 367 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 AC126118.1-201ENST00000607744 628 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 AC104073.3-201ENST00000610942 955 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 AC068137.4-201ENST00000638485 296 ntBASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.17□□□□□ -1.9
SMC4Q9NTJ3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 SET-203ENST00000372688 801 ntTSL 2 BASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 SNORA75B-201ENST00000384053 137 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 Y_RNA.517-201ENST00000384551 106 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 Y_RNA.582-201ENST00000391023 95 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 CISD1P1-201ENST00000393907 327 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 AL356057.2-201ENST00000403318 432 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 AC007560.1-201ENST00000426912 237 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 AL451074.3-201ENST00000437709 472 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 AC022493.1-201ENST00000492984 337 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 RPL37P25-201ENST00000507308 276 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 AC091133.4-201ENST00000511142 308 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 AC135279.1-201ENST00000543493 504 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 AC103810.1-201ENST00000579873 453 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 AC078795.2-201ENST00000602835 1252 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 AL645944.1-201ENST00000603857 493 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 U4.3-201ENST00000621047 82 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 AC010297.1-201ENST00000623948 149 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 MIR7515-201ENST00000637837 67 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 AC004520.1-201ENST00000608362 1413 ntBASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SMC4Q9NTJ3 MTND5P26-201ENST00000426018 1752 ntBASIC3.15□□□□□ -1.9
SMC4Q9NTJ3 AL136360.1-201ENST00000503377 1900 ntBASIC3.15□□□□□ -1.9
SMC4Q9NTJ3 Y_RNA.159-201ENST00000363674 87 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 RNU6-461P-201ENST00000364195 107 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 SNORD115-7-201ENST00000365306 82 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 PTGES3P4-201ENST00000426243 356 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms