Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 AC009969.1-201ENST00000438726 172 ntBASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 RPL21P10-201ENST00000463521 490 ntBASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 RN7SL283P-201ENST00000489055 303 ntBASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 HIGD1AP13-201ENST00000509878 289 ntBASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 RNA5SP385-201ENST00000515947 110 ntBASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 RNU6-189P-201ENST00000516120 101 ntBASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 RN7SKP43-201ENST00000516173 320 ntBASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 SNORA74D-201ENST00000516404 141 ntBASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 RNU6-1038P-201ENST00000516516 104 ntBASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 AL121821.2-201ENST00000556081 394 ntBASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 MIR3200-201ENST00000580767 85 ntBASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 MIR4506-201ENST00000584693 77 ntBASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 VN1R80P-201ENST00000597126 338 ntBASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 AC092807.2-201ENST00000609367 243 ntBASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 AC002064.3-201ENST00000623448 346 ntBASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
SLC6A13Q9NSD5 RNU6-266P-201ENST00000364225 107 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 RNU6-522P-201ENST00000364497 107 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 Y_RNA.324-201ENST00000365165 102 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 Y_RNA.378-201ENST00000365652 113 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 RAP1BP3-201ENST00000407180 549 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 U3.37-201ENST00000408528 213 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 RPLP0P7-201ENST00000416050 667 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC009414.1-201ENST00000427200 443 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC097713.2-201ENST00000430199 356 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 RPS29P12-201ENST00000460178 152 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 HMGN2P26-201ENST00000463169 339 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC113155.1-201ENST00000511141 769 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 SNORA25.17-201ENST00000517184 124 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 MIR5195-201ENST00000583555 115 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 UBL5P2-201ENST00000583788 219 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC078899.3-201ENST00000599065 212 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AL355877.2-201ENST00000603670 358 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC092747.3-201ENST00000603769 301 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AL020991.1-201ENST00000612314 373 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC103705.1-201ENST00000619013 241 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 SCARNA4-202ENST00000625402 129 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC099654.7-201ENST00000635788 2127 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC010889.1-201ENST00000566193 2666 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC093010.3-201ENST00000570269 15214 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 AC008264.2-201ENST00000610193 3731 ntBASIC2.9□□□□□ -1.95
SLC6A13Q9NSD5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 RNA5SP267-201ENST00000364893 126 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 SNORA7.4-201ENST00000384249 137 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 MIR887-201ENST00000401258 79 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 RPL7P10-201ENST00000417407 739 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 PGBD4P6-201ENST00000421501 610 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 MTND1P2-201ENST00000430604 821 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 AL139415.2-201ENST00000431968 163 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 AL161651.1-201ENST00000440882 223 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 NFU1P2-201ENST00000448700 469 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 AC092001.1-201ENST00000453012 261 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 AC233279.1-201ENST00000455300 423 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 AL590639.1-201ENST00000456484 337 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 AF213884.2-201ENST00000510417 903 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 AP004607.1-201ENST00000524456 203 ntBASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.89□□□□□ -1.95
SLC6A13Q9NSD5 AL035413.2-201ENST00000604801 525 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms