Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RPL26P26-201ENST00000480251 434 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 AC104164.2-201ENST00000496953 495 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 AC015795.1-201ENST00000513669 327 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 RNA5SP272-201ENST00000516095 111 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 MTND6P33-201ENST00000571794 183 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 AC005828.6-201ENST00000606610 232 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 AL592437.2-201ENST00000421655 2434 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
NUCKS1Q9H1E3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NUCKS1Q9H1E3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.9□□□□□ -1.62
NUCKS1Q9H1E3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NUCKS1Q9H1E3 RNA5SP307-201ENST00000362863 116 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 RNU6-1167P-201ENST00000363227 94 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 Y_RNA.570-201ENST00000384750 101 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 AL357139.1-201ENST00000407792 426 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 RNA5SP104-201ENST00000410989 118 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 AC004552.1-201ENST00000419089 348 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 AC010154.1-201ENST00000425857 269 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 AC009296.1-201ENST00000443146 155 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 RPS29P33-201ENST00000456717 146 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 RN7SL354P-201ENST00000469282 294 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 RPS26P3-201ENST00000470205 348 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 AC090543.2-201ENST00000483963 348 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 AC004057.1-201ENST00000485827 348 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 IGKV1-32-201ENST00000519290 311 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 AP006289.1-201ENST00000538089 277 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 MIR5692C2-201ENST00000577959 77 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 AL161798.1-201ENST00000604630 131 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 MIR6820-201ENST00000611508 62 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 MIR6780A-201ENST00000615089 68 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 AL138721.1-201ENST00000616756 179 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 SCARNA4-201ENST00000629045 128 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 PHKBP1-201ENST00000450951 1951 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 AC233981.2-201ENST00000611524 1614 ntBASIC4.9□□□□□ -1.63
NUCKS1Q9H1E3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 RNA5SP361-201ENST00000362686 118 ntBASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 RNA5SP505-201ENST00000364748 108 ntBASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 RNU6-818P-201ENST00000364837 108 ntBASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 MIR10A-201ENST00000385043 110 ntBASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 MIR569-201ENST00000385228 96 ntBASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 MIR298-201ENST00000401212 88 ntBASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 AC009237.7-201ENST00000447357 229 ntBASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 AL645939.1-201ENST00000453429 797 ntBASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 AC117440.1-201ENST00000474107 571 ntBASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 AC010409.1-201ENST00000487382 476 ntBASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 MFSD8-216ENST00000641147 4009 ntBASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.89□□□□□ -1.63
NUCKS1Q9H1E3 CPHL1P-201ENST00000461341 3407 ntBASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 AL079305.1-201ENST00000623159 3008 ntBASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 AC079741.1-201ENST00000321498 212 ntBASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 RNU6-653P-201ENST00000363074 106 ntBASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 RNU6-336P-201ENST00000364891 107 ntBASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 Y_RNA.571-201ENST00000384753 98 ntBASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 RNA5SP213-201ENST00000391031 106 ntBASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 RNA5SP239-201ENST00000410218 129 ntBASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 MTATP6P4-201ENST00000427725 675 ntBASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 AL627311.1-201ENST00000431514 115 ntBASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 PPBPP1-201ENST00000510807 373 ntBASIC4.88□□□□□ -1.63
NUCKS1Q9H1E3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms