Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC096772.1-201ENST00000609146 564 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 AC130324.3-201ENST00000614165 542 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 MTND5P42-201ENST00000637720 498 ntBASIC1.23□□□□□ -2.21
NKX6-2Q9C056 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.22□□□□□ -2.21
NKX6-2Q9C056 SMIM11P1-201ENST00000369586 178 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
NKX6-2Q9C056 Y_RNA.534-201ENST00000384599 112 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 MIR301A-201ENST00000385261 86 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 RNA5SP465-201ENST00000391195 109 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.22□□□□□ -2.21
NKX6-2Q9C056 RNU2-32P-201ENST00000411193 191 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 RN7SKP192-201ENST00000411291 327 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 AC092809.3-201ENST00000415453 231 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.22□□□□□ -2.21
NKX6-2Q9C056 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.22□□□□□ -2.21
NKX6-2Q9C056 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.22□□□□□ -2.21
NKX6-2Q9C056 TIMM9P1-201ENST00000436122 256 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.22□□□□□ -2.21
NKX6-2Q9C056 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.22□□□□□ -2.21
NKX6-2Q9C056 RPS29P11-201ENST00000496507 171 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.22□□□□□ -2.21
NKX6-2Q9C056 AL512310.1-201ENST00000548639 172 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 AL157871.3-201ENST00000557231 293 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
NKX6-2Q9C056 MIR4255-201ENST00000579351 72 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.22□□□□□ -2.21
NKX6-2Q9C056 MIR544B-201ENST00000582372 78 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.22□□□□□ -2.21
NKX6-2Q9C056 MIR502-201ENST00000606349 86 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 AC022893.3-201ENST00000607665 437 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 AC091965.4-201ENST00000607691 587 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.22□□□□□ -2.21
NKX6-2Q9C056 AC009269.6-201ENST00000621778 588 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 AL356596.1-201ENST00000624230 379 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.22□□□□□ -2.21
NKX6-2Q9C056 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.22□□□□□ -2.21
NKX6-2Q9C056 AC092104.1-201ENST00000497346 1441 ntBASIC1.22□□□□□ -2.21
NKX6-2Q9C056 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 SNORA4.1-201ENST00000364263 144 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 SNORA4.3-201ENST00000365564 137 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 SNORD14D-201ENST00000384390 87 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 RNU6-769P-201ENST00000384407 104 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 MIR29C-201ENST00000385231 88 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 RNU11-3P-201ENST00000391111 133 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 RNU2-36P-201ENST00000410361 191 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 RN7SKP223-201ENST00000410582 62 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 RNU2-48P-201ENST00000410694 191 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AL139415.2-201ENST00000431968 163 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 MTCO2P20-201ENST00000437339 673 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AC012308.1-201ENST00000451232 178 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AL583843.1-201ENST00000456070 346 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 FCF1P6-201ENST00000456841 595 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 PRELID3BP1-201ENST00000457142 540 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 RNU6-914P-201ENST00000516749 109 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AC010376.1-201ENST00000522101 334 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 BNIP3P33-201ENST00000598912 569 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AL670379.6-201ENST00000603753 252 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AL670379.11-201ENST00000604059 253 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AC008162.1-201ENST00000604718 254 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AL670379.1-201ENST00000604752 252 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AL670379.5-201ENST00000605253 252 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AL670379.12-201ENST00000605291 253 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 BCRP9-201ENST00000605312 388 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AL670379.8-201ENST00000605353 252 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AL670379.7-201ENST00000605823 252 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AC098614.4-201ENST00000607601 462 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AC012360.2-201ENST00000609349 391 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AL359314.1-201ENST00000616913 261 ntBASIC1.21□□□□□ -2.22
NKX6-2Q9C056 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.21□□□□□ -2.22
NKX6-2Q9C056 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
NKX6-2Q9C056 RNU6-723P-201ENST00000383973 107 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 SNORA75B-201ENST00000384053 137 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 RNU6-1257P-201ENST00000384625 110 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 MIR483-201ENST00000385070 76 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 RNA5SP212-201ENST00000391223 107 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
NKX6-2Q9C056 Z92545.1-201ENST00000411782 234 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 UBE2V1P10-201ENST00000414685 269 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 ELOCP17-201ENST00000414751 326 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 AC009518.2-201ENST00000418056 731 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 ELOCP9-201ENST00000418624 239 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 Z98742.3-201ENST00000418637 326 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 RPS3AP37-201ENST00000419176 745 ntBASIC1.2□□□□□ -2.22
NKX6-2Q9C056 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms