Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC008628.1-201ENST00000508663 265 ntBASIC1.33□□□□□ -2.2
TRIM4Q9C037 RNU6-703P-201ENST00000516946 107 ntBASIC1.33□□□□□ -2.2
TRIM4Q9C037 AP003497.1-201ENST00000528472 562 ntBASIC1.33□□□□□ -2.2
TRIM4Q9C037 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
TRIM4Q9C037 AF038458.1-201ENST00000588406 262 ntBASIC1.33□□□□□ -2.2
TRIM4Q9C037 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.33□□□□□ -2.2
TRIM4Q9C037 AC243773.3-201ENST00000613270 256 ntBASIC1.33□□□□□ -2.2
TRIM4Q9C037 AC008759.3-201ENST00000613300 508 ntBASIC1.33□□□□□ -2.2
TRIM4Q9C037 AC006338.1-201ENST00000618453 749 ntBASIC1.33□□□□□ -2.2
TRIM4Q9C037 AP003476.1-201ENST00000623984 516 ntBASIC1.33□□□□□ -2.2
TRIM4Q9C037 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
TRIM4Q9C037 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
TRIM4Q9C037 RNU6-1167P-201ENST00000363227 94 ntBASIC1.32□□□□□ -2.2
TRIM4Q9C037 SNORD26-201ENST00000384147 75 ntBASIC1.32□□□□□ -2.2
TRIM4Q9C037 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.32□□□□□ -2.2
TRIM4Q9C037 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
TRIM4Q9C037 AL590084.2-201ENST00000401481 382 ntBASIC1.32□□□□□ -2.2
TRIM4Q9C037 MIR1283-2-201ENST00000408621 87 ntBASIC1.32□□□□□ -2.2
TRIM4Q9C037 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.32□□□□□ -2.2
TRIM4Q9C037 AC092001.1-201ENST00000453012 261 ntBASIC1.32□□□□□ -2.2
TRIM4Q9C037 AC112771.1-201ENST00000463581 102 ntBASIC1.32□□□□□ -2.2
TRIM4Q9C037 AC093801.2-201ENST00000503966 1050 ntBASIC1.32□□□□□ -2.2
TRIM4Q9C037 MTND5P13-201ENST00000513046 1079 ntBASIC1.32□□□□□ -2.2
TRIM4Q9C037 RN7SKP179-201ENST00000516126 217 ntBASIC1.32□□□□□ -2.2
TRIM4Q9C037 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.32□□□□□ -2.2
TRIM4Q9C037 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.32□□□□□ -2.2
TRIM4Q9C037 AC079598.5-201ENST00000547460 117 ntBASIC1.32□□□□□ -2.2
TRIM4Q9C037 AL356432.3-201ENST00000568952 465 ntBASIC1.32□□□□□ -2.2
TRIM4Q9C037 AL391646.1-201ENST00000603860 190 ntBASIC1.32□□□□□ -2.2
TRIM4Q9C037 uc_338.12-201ENST00000616344 181 ntBASIC1.32□□□□□ -2.2
TRIM4Q9C037 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.31□□□□□ -2.2
TRIM4Q9C037 OR5T3-201ENST00000303059 1023 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
TRIM4Q9C037 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
TRIM4Q9C037 RNU6-939P-201ENST00000384634 107 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 RNU6-114P-201ENST00000384704 105 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 BX664727.1-201ENST00000416024 466 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 AL353621.1-201ENST00000418219 243 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 EIF4EP2-201ENST00000422816 654 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 DPRXP1-201ENST00000426312 460 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 COX7BP2-201ENST00000437976 242 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 AL078601.1-201ENST00000444542 271 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 AL441985.1-201ENST00000457727 251 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.31□□□□□ -2.2
TRIM4Q9C037 RNA5SP57-201ENST00000459463 123 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.31□□□□□ -2.2
TRIM4Q9C037 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.31□□□□□ -2.2
TRIM4Q9C037 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.31□□□□□ -2.2
TRIM4Q9C037 AP004247.1-201ENST00000531556 1289 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.31□□□□□ -2.2
TRIM4Q9C037 MRPS36P5-201ENST00000551909 298 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.31□□□□□ -2.2
TRIM4Q9C037 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.31□□□□□ -2.2
TRIM4Q9C037 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.31□□□□□ -2.2
TRIM4Q9C037 AC005730.3-201ENST00000583067 366 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.31□□□□□ -2.2
TRIM4Q9C037 SNRPGP17-201ENST00000603780 214 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 AL161798.1-201ENST00000604630 131 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 AC069304.2-201ENST00000605154 435 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 NDUFA8P1-201ENST00000605525 367 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 AL050343.2-201ENST00000607338 280 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 AC009237.15-201ENST00000610252 501 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 AL157770.1-201ENST00000623049 439 ntBASIC1.31□□□□□ -2.2
TRIM4Q9C037 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 SNORD115-3-201ENST00000363100 82 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 RNU6-97P-201ENST00000363387 104 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 RNU6-338P-201ENST00000383888 105 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 SNORD65.1-201ENST00000390889 71 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 MIR1302-8-201ENST00000408342 128 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 AL022400.1-201ENST00000423946 935 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 RPL36AP53-201ENST00000432891 316 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.3□□□□□ -2.2
TRIM4Q9C037 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.3□□□□□ -2.2
TRIM4Q9C037 KATNBL1P3-201ENST00000443475 909 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
TRIM4Q9C037 MTND1P18-201ENST00000448191 573 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 KATNBL1P6-201ENST00000453433 915 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 MTND1P9-201ENST00000453775 944 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 AC006512.1-201ENST00000468816 291 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.3□□□□□ -2.2
TRIM4Q9C037 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 AP003033.1-201ENST00000527244 415 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 ELOCP5-201ENST00000604924 333 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 AC005332.6-201ENST00000613178 446 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 AL357080.1-201ENST00000617394 239 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 AL445264.1-201ENST00000621719 171 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 AC107982.1-201ENST00000507171 1300 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 AP000560.1-201ENST00000624150 1937 ntBASIC1.3□□□□□ -2.2
TRIM4Q9C037 AP000776.1-201ENST00000530032 1663 ntBASIC1.29□□□□□ -2.2
TRIM4Q9C037 NACAP2-201ENST00000318548 624 ntBASIC1.29□□□□□ -2.2
TRIM4Q9C037 RNU6-1207P-201ENST00000384343 107 ntBASIC1.29□□□□□ -2.2
TRIM4Q9C037 AL139397.2-201ENST00000404529 772 ntBASIC1.29□□□□□ -2.2
TRIM4Q9C037 AC005534.2-201ENST00000431047 433 ntBASIC1.29□□□□□ -2.2
TRIM4Q9C037 MTATP6P30-201ENST00000443540 664 ntBASIC1.29□□□□□ -2.2
TRIM4Q9C037 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.29□□□□□ -2.2
TRIM4Q9C037 OR6C5P-201ENST00000452388 923 ntBASIC1.29□□□□□ -2.2
TRIM4Q9C037 AC021382.1-201ENST00000483523 359 ntBASIC1.29□□□□□ -2.2
TRIM4Q9C037 MTCYBP18-201ENST00000501056 747 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms