Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXP3Q9BZS1 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXP3Q9BZS1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.21□□□□□ -1.74
FOXP3Q9BZS1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXP3Q9BZS1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 Y_RNA.183-201ENST00000363882 113 ntBASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 RNU6-827P-201ENST00000365553 106 ntBASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 RNA5SP283-201ENST00000365604 119 ntBASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 Z85995.1-201ENST00000415547 335 ntBASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 RPEP5-201ENST00000441137 268 ntBASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 RNA5SP246-201ENST00000458909 119 ntBASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 SNORA84-201ENST00000459229 133 ntBASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 TRBVB-201ENST00000477100 408 ntBASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 RPL30P10-201ENST00000488148 337 ntBASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 RPL21P13-201ENST00000488305 481 ntBASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 RNA5SP49-201ENST00000516450 115 ntBASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 RNU6-570P-201ENST00000517051 105 ntBASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 MIR8059-201ENST00000620427 81 ntBASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.2□□□□□ -1.74
FOXP3Q9BZS1 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 NCAPGP1-201ENST00000505112 1814 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 RN7SKP280-201ENST00000364196 304 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 RNA5SP235-201ENST00000365411 114 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 MIR1251-201ENST00000408552 70 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 RNA5SP36-201ENST00000410197 133 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 RNU4-61P-201ENST00000411243 107 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 RPS12P23-201ENST00000419579 400 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 AC244098.2-201ENST00000422068 99 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 MTND2P29-201ENST00000438595 412 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 HIGD1AP2-201ENST00000446367 280 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 RN7SL691P-201ENST00000494487 301 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 MLLT10P2-201ENST00000506434 249 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 Y_RNA.673-201ENST00000516306 88 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 SNORA31.20-201ENST00000517111 133 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 AP004371.1-201ENST00000525240 214 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 MIR4644-201ENST00000579929 84 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 AC005255.1-201ENST00000593748 216 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 MIR92B-201ENST00000607575 96 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 UBE3AP2-201ENST00000429033 2259 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 AP000560.1-201ENST00000624150 1937 ntBASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXP3Q9BZS1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 AC004925.1-201ENST00000624256 2706 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 RNU1-76P-201ENST00000362903 159 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 Y_RNA.105-201ENST00000363182 111 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 Y_RNA.117-201ENST00000363294 101 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 RNU6-1062P-201ENST00000383908 107 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 RNU6-130P-201ENST00000411112 103 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 Y_RNA.623-201ENST00000411128 95 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 RPL23AP45-201ENST00000476406 468 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 RPL21P129-201ENST00000491732 478 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 RPL29P14-201ENST00000495837 428 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 BTF3L4P4-201ENST00000506381 449 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 RNA5SP519-201ENST00000516480 119 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 AMZ2P1-203ENST00000565833 850 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms