Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 MIR4474-201ENST00000579189 78 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 RN7SL600P-201ENST00000581811 299 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 MIR4273-201ENST00000582824 84 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 VN1R107P-201ENST00000601784 209 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 AC078795.3-201ENST00000602913 472 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 MIR8059-201ENST00000620427 81 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 HSPA8P1-201ENST00000425843 1833 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 AC066616.2-201ENST00000559334 1481 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 Y_RNA.5-201ENST00000362334 102 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 RNU6-858P-201ENST00000362436 107 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 U3.6-201ENST00000363622 211 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 Y_RNA.463-201ENST00000384271 102 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 SNORA41-201ENST00000384675 132 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 AL591034.2-201ENST00000402839 359 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 MIR1183-201ENST00000408856 89 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 RNU6-55P-201ENST00000411092 107 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 PMCHL1-202ENST00000423102 261 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 AL163540.1-201ENST00000485382 386 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 RN7SL691P-201ENST00000494487 301 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 AC022493.2-201ENST00000506122 481 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 AC023632.4-201ENST00000517783 191 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 BNIP3P16-201ENST00000589779 534 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 MIR6867-201ENST00000610636 67 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 AC034229.5-201ENST00000624258 185 ntBASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM55Q9BYV6 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 HMGN2P8-201ENST00000391458 268 ntBASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 AC096664.2-201ENST00000411843 406 ntBASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 AL356095.1-201ENST00000417217 199 ntBASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 AL157831.1-201ENST00000426134 473 ntBASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 AL117339.2-201ENST00000430475 180 ntBASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 AL591043.1-201ENST00000432461 424 ntBASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 AC011816.1-201ENST00000441346 546 ntBASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 RPL21P23-201ENST00000446654 460 ntBASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 AL500522.2-201ENST00000448562 343 ntBASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 NIPA2P5-201ENST00000452282 464 ntBASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 RN7SL93P-201ENST00000463035 293 ntBASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 RPL23AP62-201ENST00000463396 453 ntBASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 SNORA70.14-201ENST00000516205 110 ntBASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 RNA5SP49-201ENST00000516450 115 ntBASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 CR383656.8-201ENST00000549046 145 ntBASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 AC112484.5-201ENST00000624189 228 ntBASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM55Q9BYV6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 AC233263.6-201ENST00000631132 1963 ntBASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 Y_RNA.48-201ENST00000362710 103 ntBASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 RNU6-227P-201ENST00000362865 103 ntBASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 Y_RNA.202-201ENST00000364083 110 ntBASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 SNORD6-201ENST00000365444 73 ntBASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 snosnR66.1-201ENST00000391095 99 ntBASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 AC245291.1-201ENST00000419501 328 ntBASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 HMGN2P20-201ENST00000437531 273 ntBASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 AL161651.1-201ENST00000440882 223 ntBASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 AC124916.1-201ENST00000444020 547 ntBASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 AL031183.1-201ENST00000457667 207 ntBASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 RN7SL542P-201ENST00000467147 294 ntBASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 RN7SL271P-201ENST00000487601 295 ntBASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 AC026726.1-201ENST00000512859 601 ntBASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 CBX3P8-201ENST00000532412 525 ntBASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 AC244205.2-202ENST00000635781 342 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms