Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AL356057.1-201ENST00000533798 831 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.63□□□□□ -2.31
VPS25Q9BRG1 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC0.63□□□□□ -2.31
VPS25Q9BRG1 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.63□□□□□ -2.31
VPS25Q9BRG1 AC091057.3-201ENST00000602684 733 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 AC021171.1-201ENST00000603137 706 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 AC112220.3-201ENST00000605502 502 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 AL022345.2-201ENST00000606307 135 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 AC012360.2-201ENST00000609349 391 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
VPS25Q9BRG1 U6.99-201ENST00000637524 83 ntBASIC0.63□□□□□ -2.31
VPS25Q9BRG1 RNU6-1066P-201ENST00000363573 105 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 SNORD114-2-201ENST00000363953 78 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 RNU6-898P-201ENST00000365627 104 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
VPS25Q9BRG1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.62□□□□□ -2.31
VPS25Q9BRG1 AC119751.3-201ENST00000399720 670 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 UBE2V1P8-201ENST00000437166 265 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 AC092427.1-201ENST00000439177 601 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 GDI2P2-201ENST00000445131 608 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 YWHAEP4-201ENST00000505390 198 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 HMGN1P13-201ENST00000505795 138 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 AC103851.1-201ENST00000506833 274 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 AC069306.1-201ENST00000507006 843 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.62□□□□□ -2.31
VPS25Q9BRG1 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.62□□□□□ -2.31
VPS25Q9BRG1 AL731537.2-201ENST00000561565 951 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 ZNF971P-201ENST00000562068 1249 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 AC138915.2-201ENST00000569776 97 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 AC008088.1-201ENST00000580993 280 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 MIR4637-201ENST00000582405 84 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC0.62□□□□□ -2.31
VPS25Q9BRG1 BX284668.6-201ENST00000606899 438 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 MIR1322-201ENST00000638013 71 ntBASIC0.62□□□□□ -2.31
VPS25Q9BRG1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
VPS25Q9BRG1 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
VPS25Q9BRG1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
VPS25Q9BRG1 Y_RNA.99-201ENST00000363138 105 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 RNU6-112P-201ENST00000363599 104 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 SUGT1P1-201ENST00000379514 476 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 RNU6-481P-201ENST00000384194 107 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 RNU6-114P-201ENST00000384704 105 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 USP9YP33-201ENST00000412220 421 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.61□□□□□ -2.31
VPS25Q9BRG1 AL669831.1-202ENST00000428504 417 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 GXYLT1P1-201ENST00000446657 490 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 OR2AQ1P-201ENST00000451972 200 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.61□□□□□ -2.31
VPS25Q9BRG1 RPL30P1-201ENST00000488676 339 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 RPS29P21-201ENST00000496272 170 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.61□□□□□ -2.31
VPS25Q9BRG1 AC022616.8-201ENST00000533569 253 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.61□□□□□ -2.31
VPS25Q9BRG1 AC067805.1-201ENST00000559344 470 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.61□□□□□ -2.31
VPS25Q9BRG1 MIR3683-201ENST00000580847 82 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 AP001542.2-201ENST00000593141 364 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 AC008945.2-201ENST00000606056 604 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 SNORD114-21-201ENST00000606412 72 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 AC009237.15-201ENST00000610252 501 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 MIR6134-201ENST00000617606 109 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 AC009033.1-201ENST00000624279 431 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 AC022513.1-201ENST00000624512 117 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 AC008993.2-201ENST00000631744 806 ntBASIC0.61□□□□□ -2.31
VPS25Q9BRG1 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
VPS25Q9BRG1 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
VPS25Q9BRG1 AC138393.1-203ENST00000327086 343 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 RNU6-23P-201ENST00000363283 107 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 RNU4-51P-201ENST00000364206 140 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 RNU6-188P-201ENST00000364207 107 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.6□□□□□ -2.31
VPS25Q9BRG1 UBE2V1P2-201ENST00000397758 440 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 RPL21P90-201ENST00000415692 466 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 MTND4LP14-201ENST00000429447 288 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.6□□□□□ -2.31
VPS25Q9BRG1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.6□□□□□ -2.31
VPS25Q9BRG1 MTND2P4-201ENST00000445034 1004 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 AC020550.1-201ENST00000447385 163 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 snoU13.8-201ENST00000458890 104 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.6□□□□□ -2.31
VPS25Q9BRG1 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.6□□□□□ -2.31
VPS25Q9BRG1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.6□□□□□ -2.31
VPS25Q9BRG1 RNU6-991P-201ENST00000516168 107 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 RNU2-53P-201ENST00000516257 147 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 AC136628.3-201ENST00000521868 290 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.6□□□□□ -2.31
VPS25Q9BRG1 AC136619.2-201ENST00000563361 631 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC0.6□□□□□ -2.31
VPS25Q9BRG1 MIR3660-201ENST00000584845 100 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 AC023043.2-201ENST00000589678 1026 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 MTCO2P2-201ENST00000591258 225 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 AL450270.1-201ENST00000606160 391 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 AC093788.1-201ENST00000609356 927 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 AL392048.1-201ENST00000613946 534 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 AL590240.4-201ENST00000616908 390 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 AC100821.1-201ENST00000523153 2479 ntBASIC0.6□□□□□ -2.31
VPS25Q9BRG1 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
VPS25Q9BRG1 RNU6-1065P-201ENST00000384513 106 ntBASIC0.59□□□□□ -2.31
VPS25Q9BRG1 MRPL35P1-201ENST00000404272 572 ntBASIC0.59□□□□□ -2.31
VPS25Q9BRG1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms