Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL355615.1-201ENST00000406187 641 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 MIR1283-2-201ENST00000408621 87 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 BPY2DP-201ENST00000422208 265 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.72□□□□□ -2.29
ABCA3Q99758 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.72□□□□□ -2.29
ABCA3Q99758 RNU6-775P-201ENST00000459318 96 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 HMGN1P10-201ENST00000474557 553 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.72□□□□□ -2.29
ABCA3Q99758 AC146944.4-201ENST00000602697 718 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
ABCA3Q99758 AC012676.2-201ENST00000619258 186 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 Z69720.2-201ENST00000624755 279 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.72□□□□□ -2.29
ABCA3Q99758 RNU5E-1-201ENST00000362477 120 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 Y_RNA.303-201ENST00000364998 94 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.72□□□□□ -2.29
ABCA3Q99758 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.72□□□□□ -2.29
ABCA3Q99758 AC013410.2-201ENST00000422627 201 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.72□□□□□ -2.29
ABCA3Q99758 RPL22P13-201ENST00000493291 347 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 BOLA3P3-201ENST00000505182 232 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.72□□□□□ -2.29
ABCA3Q99758 SNRPGP17-201ENST00000603780 214 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 AL589743.7-201ENST00000612637 233 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 AP005212.4-201ENST00000614206 710 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 AC040168.1-201ENST00000623594 991 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 AL512506.2-201ENST00000624472 458 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 RNU1-36P-201ENST00000365130 165 ntBASIC0.71□□□□□ -2.3
ABCA3Q99758 MIR29C-201ENST00000385231 88 ntBASIC0.71□□□□□ -2.3
ABCA3Q99758 RNA5SP25-201ENST00000410815 110 ntBASIC0.71□□□□□ -2.3
ABCA3Q99758 RPL30P7-201ENST00000479312 323 ntBASIC0.71□□□□□ -2.3
ABCA3Q99758 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.71□□□□□ -2.3
ABCA3Q99758 AC093677.1-201ENST00000514414 678 ntBASIC0.71□□□□□ -2.3
ABCA3Q99758 AP003066.2-201ENST00000529375 555 ntBASIC0.71□□□□□ -2.3
ABCA3Q99758 APOOP3-201ENST00000536787 586 ntBASIC0.71□□□□□ -2.3
ABCA3Q99758 ADAM3B-201ENST00000569937 840 ntBASIC0.71□□□□□ -2.3
ABCA3Q99758 AC008945.2-201ENST00000606056 604 ntBASIC0.71□□□□□ -2.3
ABCA3Q99758 AL359314.1-201ENST00000616913 261 ntBASIC0.71□□□□□ -2.3
ABCA3Q99758 RNU6-748P-201ENST00000384648 107 ntBASIC0.7□□□□□ -2.3
ABCA3Q99758 MIR518D-201ENST00000385014 87 ntBASIC0.7□□□□□ -2.3
ABCA3Q99758 VN1R42P-201ENST00000424651 344 ntBASIC0.7□□□□□ -2.3
ABCA3Q99758 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.7□□□□□ -2.3
ABCA3Q99758 AL512844.2-201ENST00000433990 593 ntBASIC0.7□□□□□ -2.3
ABCA3Q99758 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.7□□□□□ -2.3
ABCA3Q99758 FCF1P6-201ENST00000456841 595 ntBASIC0.7□□□□□ -2.3
ABCA3Q99758 RNU6-1256P-201ENST00000516539 103 ntBASIC0.7□□□□□ -2.3
ABCA3Q99758 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.7□□□□□ -2.3
ABCA3Q99758 OR5B19P-201ENST00000531766 928 ntBASIC0.7□□□□□ -2.3
ABCA3Q99758 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.7□□□□□ -2.3
ABCA3Q99758 MIR4636-201ENST00000582271 80 ntBASIC0.7□□□□□ -2.3
ABCA3Q99758 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.7□□□□□ -2.3
ABCA3Q99758 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.7□□□□□ -2.3
ABCA3Q99758 AC002550.2-201ENST00000621246 394 ntBASIC0.7□□□□□ -2.3
ABCA3Q99758 AC091965.5-201ENST00000624785 342 ntBASIC0.7□□□□□ -2.3
ABCA3Q99758 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.7□□□□□ -2.3
ABCA3Q99758 SNORD51-201ENST00000384320 80 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 MIR649-201ENST00000384843 97 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
ABCA3Q99758 TOMM22P2-201ENST00000430735 237 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 AL135790.2-201ENST00000437701 267 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 AC073614.1-201ENST00000438690 650 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 RPL26P9-201ENST00000457466 433 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 AC022483.1-201ENST00000514020 567 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 AC005832.3-201ENST00000537929 631 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 AC233702.2-202ENST00000562547 291 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.69□□□□□ -2.3
ABCA3Q99758 AL031176.1-201ENST00000604554 466 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 SNRPEP3-201ENST00000338402 276 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 RNU6-140P-201ENST00000384566 108 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 HMGB1P17-201ENST00000403495 628 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 MIR1265-201ENST00000408444 86 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 RNU2-70P-201ENST00000410718 179 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
ABCA3Q99758 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.69□□□□□ -2.3
ABCA3Q99758 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
ABCA3Q99758 SNORA4.4-201ENST00000515921 135 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 AC124293.1-201ENST00000530034 493 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 AC117490.2-201ENST00000610042 594 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 AC068787.1-201ENST00000623908 691 ntBASIC0.69□□□□□ -2.3
ABCA3Q99758 AL391516.1-201ENST00000554380 2449 ntBASIC0.68□□□□□ -2.3
ABCA3Q99758 RNA5SP331-201ENST00000364986 107 ntBASIC0.68□□□□□ -2.3
ABCA3Q99758 SNORD82-201ENST00000365530 70 ntBASIC0.68□□□□□ -2.3
ABCA3Q99758 RNA5SP299-201ENST00000391203 116 ntBASIC0.68□□□□□ -2.3
ABCA3Q99758 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
ABCA3Q99758 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.68□□□□□ -2.3
ABCA3Q99758 USP9YP24-201ENST00000434374 697 ntBASIC0.68□□□□□ -2.3
ABCA3Q99758 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.68□□□□□ -2.3
ABCA3Q99758 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
ABCA3Q99758 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.68□□□□□ -2.3
ABCA3Q99758 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.68□□□□□ -2.3
ABCA3Q99758 MIR5589-201ENST00000579442 60 ntBASIC0.68□□□□□ -2.3
ABCA3Q99758 MIR4514-201ENST00000581410 57 ntBASIC0.68□□□□□ -2.3
ABCA3Q99758 AC011374.2-201ENST00000607135 526 ntBASIC0.68□□□□□ -2.3
ABCA3Q99758 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
ABCA3Q99758 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.67□□□□□ -2.3
ABCA3Q99758 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
ABCA3Q99758 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
ABCA3Q99758 SNORA63.3-201ENST00000362682 132 ntBASIC0.67□□□□□ -2.3
ABCA3Q99758 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms