Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNX18Q96RF0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SNX18Q96RF0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNX18Q96RF0 AL049641.1-201ENST00000441055 1948 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNX18Q96RF0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.3□□□□□ -1.88
SNX18Q96RF0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.3□□□□□ -1.88
SNX18Q96RF0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.3□□□□□ -1.88
SNX18Q96RF0 AL359693.1-201ENST00000614959 2407 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNX18Q96RF0 SNORA33.2-201ENST00000365413 134 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 RNU6-1329P-201ENST00000365664 107 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 RNU6-890P-201ENST00000384121 107 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNX18Q96RF0 HSPE1P26-201ENST00000405341 275 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 RNU2-68P-201ENST00000410878 191 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 PMCHL1-202ENST00000423102 261 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 UBE2D3P2-201ENST00000424409 445 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 UBE2V1P4-201ENST00000425374 344 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 USP9YP30-201ENST00000430729 455 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 AC236972.1-201ENST00000433225 199 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 AL512844.2-201ENST00000433990 593 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.3□□□□□ -1.88
SNX18Q96RF0 AC009969.1-201ENST00000438726 172 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.3□□□□□ -1.88
SNX18Q96RF0 RNU7-187P-201ENST00000458985 68 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 RPS23P3-201ENST00000470993 430 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 AC139453.3-201ENST00000493276 369 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.3□□□□□ -1.88
SNX18Q96RF0 AC097473.1-201ENST00000508142 408 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 SCARNA14-201ENST00000516903 136 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 AC025755.1-201ENST00000521306 278 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 AC022695.1-201ENST00000522089 237 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 CASP1P1-201ENST00000526345 212 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.3□□□□□ -1.88
SNX18Q96RF0 MIR4444-1-201ENST00000581696 74 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 MIR4444-2-201ENST00000584390 74 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.3□□□□□ -1.88
SNX18Q96RF0 AC008739.3-201ENST00000603262 127 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 AC123912.5-201ENST00000605470 343 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 AC116312.1-201ENST00000606841 314 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.3□□□□□ -1.88
SNX18Q96RF0 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 MIR6075-201ENST00000620782 95 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 AC012442.3-202ENST00000636742 206 ntBASIC3.3□□□□□ -1.88
SNX18Q96RF0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.3□□□□□ -1.88
SNX18Q96RF0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SNX18Q96RF0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.3□□□□□ -1.88
SNX18Q96RF0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNX18Q96RF0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNX18Q96RF0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
SNX18Q96RF0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.29□□□□□ -1.88
SNX18Q96RF0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNX18Q96RF0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SNX18Q96RF0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
SNX18Q96RF0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNX18Q96RF0 MIR30E-201ENST00000362104 92 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 MIR412-201ENST00000362142 91 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 SNORA63C-201ENST00000364578 129 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 RNU6-738P-201ENST00000384531 106 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 RNU6-140P-201ENST00000384566 108 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 MIR591-201ENST00000385290 95 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.29□□□□□ -1.88
SNX18Q96RF0 Z99755.1-201ENST00000414048 380 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 AC092047.1-201ENST00000424997 240 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 AL591419.1-201ENST00000427423 339 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 NDUFB1P1-201ENST00000435191 180 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 SNRPEP9-201ENST00000436794 238 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX18Q96RF0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX18Q96RF0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX18Q96RF0 NOTCH2P1-201ENST00000443481 624 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 AL137792.2-201ENST00000443484 235 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX18Q96RF0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX18Q96RF0 HMGN2P16-201ENST00000456802 261 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX18Q96RF0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX18Q96RF0 SMURF2P1-201ENST00000514992 481 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX18Q96RF0 AC009902.1-201ENST00000519351 183 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNX18Q96RF0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.29□□□□□ -1.88
SNX18Q96RF0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNX18Q96RF0 MIR5187-201ENST00000583479 76 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 SNORA51-201ENST00000606420 132 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 RNU1-30P-201ENST00000606575 163 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.29□□□□□ -1.88
SNX18Q96RF0 AL110115.1-201ENST00000614396 364 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 RMST_4.1-201ENST00000616886 107 ntBASIC3.29□□□□□ -1.88
SNX18Q96RF0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNX18Q96RF0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SNX18Q96RF0 SNORA71.3-201ENST00000362582 128 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 Y_RNA.151-201ENST00000363566 112 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 RNU6-1059P-201ENST00000363752 98 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 RNU6-1040P-201ENST00000383974 107 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 Y_RNA.422-201ENST00000384054 114 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 RNU6-1160P-201ENST00000384546 104 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms