Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU6-1102P-201ENST00000516149 96 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.77□□□□□ -2.29
AP1S3Q96PC3 AC093249.1-201ENST00000567049 203 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 AC122134.1-202ENST00000569111 1201 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 NIFKP6-201ENST00000598115 845 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 AL158827.2-201ENST00000602494 330 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 AC107952.2-201ENST00000606048 486 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 AL020996.3-201ENST00000606617 222 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 AC092140.2-201ENST00000618027 521 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 AL691447.3-201ENST00000635020 330 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.77□□□□□ -2.29
AP1S3Q96PC3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.76□□□□□ -2.29
AP1S3Q96PC3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
AP1S3Q96PC3 Y_RNA.25-201ENST00000362528 102 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 RNU1-22P-201ENST00000363334 158 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 SNORA7.1-201ENST00000363750 139 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
AP1S3Q96PC3 RNU6-26P-201ENST00000383985 107 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.76□□□□□ -2.29
AP1S3Q96PC3 CR848007.2-201ENST00000424918 787 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.76□□□□□ -2.29
AP1S3Q96PC3 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.76□□□□□ -2.29
AP1S3Q96PC3 snoU13.26-201ENST00000459452 105 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 RPL30P12-201ENST00000474666 353 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.76□□□□□ -2.29
AP1S3Q96PC3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AC108078.1-201ENST00000508073 725 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AC117532.1-201ENST00000514638 323 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AC044913.1-201ENST00000557200 430 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AC090330.1-201ENST00000588646 764 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AP001542.2-201ENST00000593141 364 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AC091057.3-201ENST00000602684 733 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AL583856.2-201ENST00000606298 543 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 Z82243.1-201ENST00000609432 473 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AC004908.3-201ENST00000610248 625 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AC016911.1-201ENST00000613297 452 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AL157834.3-201ENST00000615543 103 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AC013470.4-201ENST00000619978 986 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AL353770.2-201ENST00000620024 78 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AC120349.2-201ENST00000625002 298 ntBASIC0.76□□□□□ -2.29
AP1S3Q96PC3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
AP1S3Q96PC3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
AP1S3Q96PC3 RNU6-792P-201ENST00000363490 107 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 RNU6-359P-201ENST00000365466 108 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 U8.10-201ENST00000384260 133 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 RNU6-549P-201ENST00000384433 107 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 RNU6-1274P-201ENST00000384557 107 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 AL590084.2-201ENST00000401481 382 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.75□□□□□ -2.29
AP1S3Q96PC3 NCOR1P3-201ENST00000420479 303 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 OOSP1P1-201ENST00000423265 274 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.75□□□□□ -2.29
AP1S3Q96PC3 AL022238.1-201ENST00000442557 355 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 GDI2P2-201ENST00000445131 608 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 snoU13.8-201ENST00000458890 104 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 AC108729.1-201ENST00000487812 947 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
AP1S3Q96PC3 SNORD116-28-201ENST00000516123 91 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 AC109329.1-201ENST00000518744 317 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 AC084364.2-201ENST00000546924 395 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 AC136619.2-201ENST00000563361 631 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 AC098614.4-201ENST00000607601 462 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 MIR6078-201ENST00000611069 100 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
AP1S3Q96PC3 AC009269.6-201ENST00000621778 588 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 AP003485.1-201ENST00000625093 753 ntBASIC0.75□□□□□ -2.29
AP1S3Q96PC3 RNU1-124P-201ENST00000363861 145 ntBASIC0.74□□□□□ -2.29
AP1S3Q96PC3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.74□□□□□ -2.29
AP1S3Q96PC3 RNU6-546P-201ENST00000383991 107 ntBASIC0.74□□□□□ -2.29
AP1S3Q96PC3 RNU6-1207P-201ENST00000384343 107 ntBASIC0.74□□□□□ -2.29
AP1S3Q96PC3 RPL17P50-201ENST00000396131 546 ntBASIC0.74□□□□□ -2.29
AP1S3Q96PC3 MIR1267-201ENST00000408723 78 ntBASIC0.74□□□□□ -2.29
AP1S3Q96PC3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.74□□□□□ -2.29
AP1S3Q96PC3 USP9YP26-201ENST00000421008 661 ntBASIC0.74□□□□□ -2.29
AP1S3Q96PC3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.74□□□□□ -2.29
AP1S3Q96PC3 MTCO3P5-201ENST00000433620 714 ntBASIC0.74□□□□□ -2.29
AP1S3Q96PC3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.74□□□□□ -2.29
AP1S3Q96PC3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.74□□□□□ -2.29
AP1S3Q96PC3 AC010631.1-201ENST00000474150 156 ntBASIC0.74□□□□□ -2.29
AP1S3Q96PC3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.74□□□□□ -2.29
AP1S3Q96PC3 MTCYBP43-201ENST00000513621 740 ntBASIC0.74□□□□□ -2.29
AP1S3Q96PC3 RNU7-40P-201ENST00000516397 64 ntBASIC0.74□□□□□ -2.29
AP1S3Q96PC3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.74□□□□□ -2.29
AP1S3Q96PC3 AC004492.1-201ENST00000607036 742 ntBASIC0.74□□□□□ -2.29
AP1S3Q96PC3 AL355802.3-201ENST00000607571 545 ntBASIC0.74□□□□□ -2.29
AP1S3Q96PC3 AL445264.1-201ENST00000621719 171 ntBASIC0.74□□□□□ -2.29
AP1S3Q96PC3 AC068205.3-201ENST00000636385 468 ntBASIC0.74□□□□□ -2.29
AP1S3Q96PC3 AC099063.3-201ENST00000642066 185 ntBASIC0.74□□□□□ -2.29
AP1S3Q96PC3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
AP1S3Q96PC3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.73□□□□□ -2.29
AP1S3Q96PC3 AC138393.1-203ENST00000327086 343 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 RNU6-457P-201ENST00000363999 107 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 RNU6-944P-201ENST00000364023 107 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 RNU4-51P-201ENST00000364206 140 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms