Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 AC025946.2-201ENST00000603398 234 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.96□□□□□ -1.78
PTCHD1Q96NR3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 Z82217.1-201ENST00000625157 8149 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 AC011266.1-201ENST00000624119 3569 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 RNU6-140P-201ENST00000384566 108 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 RPL21P75-201ENST00000396599 483 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 RPL21P28-201ENST00000401418 483 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 AL590556.1-201ENST00000423231 483 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 AC092047.1-201ENST00000424997 240 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 RNU7-87P-201ENST00000459343 62 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 RPL21P11-201ENST00000461458 483 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 RPL21P39-201ENST00000463605 483 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 AC087190.1-201ENST00000484462 480 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 AC107032.1-201ENST00000485945 480 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 AC132942.1-201ENST00000486753 483 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 AC093591.1-201ENST00000491435 481 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 RPL21P16-201ENST00000495531 483 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 HMGB1P35-201ENST00000503360 598 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 PPBPP1-201ENST00000510807 373 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 AC067942.3-201ENST00000512025 362 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 RNU7-175P-201ENST00000515915 61 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 Y_RNA.706-201ENST00000516933 99 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 MTND6P33-201ENST00000571794 183 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 AC012433.1-201ENST00000588916 398 ntBASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
PTCHD1Q96NR3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 RNA5SP513-201ENST00000364648 118 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 MIR607-201ENST00000385241 96 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 BTF3L4P2-201ENST00000392798 346 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 AL603908.1-201ENST00000406098 201 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 MIR548I3-201ENST00000408378 149 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 MIR548I1-201ENST00000408810 149 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 RNU2-25P-201ENST00000411041 191 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 RNA5SP31-201ENST00000411144 127 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 HLA-N-201ENST00000437516 135 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 RPL23AP22-201ENST00000437556 453 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 AL451050.1-201ENST00000450126 415 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 CEACAMP4-201ENST00000457676 421 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 AC098869.1-201ENST00000481627 292 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 RPL31P13-201ENST00000484151 370 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 AC010469.2-201ENST00000496412 480 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 AC025884.1-201ENST00000556034 378 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 AC060766.3-201ENST00000591442 263 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 RPL23AP78-201ENST00000599928 470 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 AC073410.2-201ENST00000603240 332 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 AC004825.2-201ENST00000616634 455 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 AC118273.1-201ENST00000525324 3006 ntBASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.94□□□□□ -1.78
PTCHD1Q96NR3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 RNU6-105P-201ENST00000363909 104 ntBASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 MIR493-201ENST00000385254 89 ntBASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 U3.37-201ENST00000408528 213 ntBASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 RNU6-1203P-201ENST00000410703 110 ntBASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 AP000275.1-201ENST00000411943 390 ntBASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 AC124916.1-201ENST00000444020 547 ntBASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 AL590664.1-201ENST00000448065 339 ntBASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 HMGB3P17-201ENST00000504195 649 ntBASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 FTH1P9-201ENST00000513251 355 ntBASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 RNU2-58P-201ENST00000516403 183 ntBASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 RNU6-703P-201ENST00000516946 107 ntBASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.93□□□□□ -1.78
PTCHD1Q96NR3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms