Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU6-6P-201ENST00000606623 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 Y_RNA.812-201ENST00000610788 101 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 AL161423.1-201ENST00000613700 262 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 Y_RNA.784-201ENST00000613803 101 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 MIR8058-201ENST00000615737 89 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 Y_RNA.787-201ENST00000616522 101 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 Y_RNA.780-201ENST00000617336 101 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 Y_RNA.801-201ENST00000619005 101 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 U4.6-201ENST00000621618 127 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AC058791.1-201ENST00000608412 3198 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 MTCO1P12-201ENST00000414273 1543 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 SNORA1.3-201ENST00000384676 136 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 SNORA75.4-201ENST00000391278 119 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 RNU6-1050P-201ENST00000410388 107 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 Z99755.1-201ENST00000414048 380 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 RPS29P4-201ENST00000414733 161 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AC093578.1-201ENST00000415219 368 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 HMGN2P30-201ENST00000423237 256 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AL118496.2-201ENST00000448300 230 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 MTATP6P7-201ENST00000453315 681 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 PCMTD1P1-201ENST00000455560 355 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 ELOCP24-201ENST00000456370 334 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 RNU6-1037P-201ENST00000459571 107 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 SNRPGP3-201ENST00000469405 227 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AC018437.1-201ENST00000492214 406 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AC110768.1-201ENST00000509222 400 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 MTCYBP40-201ENST00000509390 1135 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AC093303.1-201ENST00000514549 295 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 RNU1-103P-201ENST00000516502 125 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 RNU6-703P-201ENST00000516946 107 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AC098657.3-201ENST00000620434 263 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 Z69720.2-201ENST00000624755 279 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AF127577.6-201ENST00000623352 2191 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AL049781.1-201ENST00000623195 3585 ntBASIC3.25□□□□□ -1.89
CTHRC1Q96CG8 AP001148.1-201ENST00000624124 2359 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 Y_RNA.138-201ENST00000363462 102 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 RNU6-1035P-201ENST00000384477 107 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 MIR23A-201ENST00000385245 73 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 EI24P2-201ENST00000397776 1076 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 MIR888-201ENST00000401186 77 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 RNA5SP44-201ENST00000410446 133 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 AP000907.1-201ENST00000428428 510 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 YME1L1P1-201ENST00000429435 297 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 AC097713.2-201ENST00000430199 356 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 RPS15AP10-201ENST00000432472 382 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 SNRPEP4-201ENST00000435815 279 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 RPL37P4-201ENST00000448908 268 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 MRPS31P2-201ENST00000451581 518 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 AC091153.1-201ENST00000466297 402 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 RPL23AP14-201ENST00000468281 468 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 AC109479.2-201ENST00000517842 174 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 AC011602.1-201ENST00000546484 331 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 LINC00933-203ENST00000559812 219 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 AC008121.1-201ENST00000603244 268 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 AL160281.1-201ENST00000605307 311 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 AC018462.2-201ENST00000605375 395 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 AL080274.1-201ENST00000605565 220 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 XIST_intron.1-201ENST00000619444 68 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 AL669831.3-213ENST00000636676 183 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 KPNA2P1-201ENST00000458289 1591 ntBASIC3.24□□□□□ -1.89
CTHRC1Q96CG8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CTHRC1Q96CG8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 250.9 ms