Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC007283.2-201ENST00000424739 197 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 MTND6P13-201ENST00000443510 523 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 MTND2P22-201ENST00000444325 1033 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 MTND2P4-201ENST00000445034 1004 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 GAPDHP17-201ENST00000449858 1001 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 snoU13.28-201ENST00000459235 104 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AC019176.1-201ENST00000518519 225 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 CASP1P1-201ENST00000526345 212 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 RPL21P5-201ENST00000554662 472 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 MIR3146-201ENST00000580367 79 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 MIR4307-201ENST00000582802 84 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 MIR4293-201ENST00000584305 78 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AC022079.1-201ENST00000621546 602 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AL136313.1-201ENST00000624804 202 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AC099654.13-201ENST00000639774 207 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 AL354685.2-201ENST00000448218 1447 ntBASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 U3.4-201ENST00000363352 213 ntBASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 SNORD116-1-201ENST00000384335 95 ntBASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 FO393413.1-201ENST00000402892 195 ntBASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 AL358453.1-201ENST00000422522 250 ntBASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 RAC1P6-201ENST00000423911 575 ntBASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 USP12PX-201ENST00000432383 1057 ntBASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 SNORA18.6-201ENST00000516792 115 ntBASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 AC005771.1-201ENST00000585581 349 ntBASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 U73023.1-201ENST00000603134 700 ntBASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 MTCYBP22-201ENST00000603788 447 ntBASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 RNU6-87P-201ENST00000607561 108 ntBASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 AL603755.1-201ENST00000619504 163 ntBASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.69□□□□□ -2.14
SHROOM3Q8TF72 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 RNU6-1027P-201ENST00000383998 107 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 RNU2-39P-201ENST00000410604 198 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 RNA5SP38-201ENST00000410750 119 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 MTCO2P34-201ENST00000421994 607 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 HMGN2P30-201ENST00000423237 256 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 PPP1R11P2-201ENST00000423543 382 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AC244035.1-201ENST00000430042 390 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 RPL22P17-201ENST00000438729 315 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 RPS20P20-201ENST00000460498 340 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 RNA5SP102-201ENST00000516865 106 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AP003181.2-201ENST00000528941 181 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 DUXAP4-201ENST00000603046 613 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AC239868.4-201ENST00000608318 671 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AC090970.3-201ENST00000612566 866 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 RNY4P24-201ENST00000362735 96 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 SNORA16.1-201ENST00000364597 132 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 SET-203ENST00000372688 801 ntTSL 2 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 MIR19A-201ENST00000384878 82 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 SNORA40C-201ENST00000391285 128 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 ELOCP4-201ENST00000420090 333 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AC006366.1-201ENST00000422002 759 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 HMGN2P19-201ENST00000425149 265 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 RPS27AP8-201ENST00000452665 445 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AL135752.1-201ENST00000479477 471 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 MTND1P3-201ENST00000484956 952 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AL049874.1-201ENST00000489560 388 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AC114797.1-201ENST00000514003 728 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 FABP5P5-201ENST00000515537 406 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AL391840.1-201ENST00000571144 367 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms