Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 RNU6-1059P-201ENST00000363752 98 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 MIR199A2-201ENST00000385289 110 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AL513475.1-201ENST00000406602 315 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 FTH1P15-201ENST00000406984 280 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 RNU6-954P-201ENST00000411355 107 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AC011742.1-201ENST00000431448 434 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AC124916.1-201ENST00000444020 547 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AC007677.1-201ENST00000445757 515 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 RPL21P23-201ENST00000446654 460 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 SNORD105B-201ENST00000458770 79 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 RNU7-23P-201ENST00000459465 62 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 MRPL42P6-201ENST00000486397 371 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AC074250.1-201ENST00000511117 192 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AC026782.1-201ENST00000512952 449 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 ACA59.1-201ENST00000515966 143 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 Y_RNA.670-201ENST00000516255 105 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 IGKV2-38-201ENST00000517443 247 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AL163153.1-201ENST00000554223 283 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AL157817.1-201ENST00000614264 790 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AC103858.2-201ENST00000621471 543 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AC138627.2-201ENST00000624202 601 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 U4.7-201ENST00000638126 106 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AC018555.1-201ENST00000567548 1980 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 AC233263.6-201ENST00000631132 1963 ntBASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.92□□□□□ -1.78
SYNPOQ8N3V7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 MIR218-2-201ENST00000385006 110 ntBASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 MIR591-201ENST00000385290 95 ntBASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 RNU6-1245P-201ENST00000411130 106 ntBASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 SAR1AP4-201ENST00000429225 591 ntBASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 MTND3P9-201ENST00000429526 346 ntBASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 AC027575.1-201ENST00000481064 460 ntBASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 SNORA31.21-201ENST00000517180 77 ntBASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 AC109446.1-201ENST00000566172 220 ntBASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 MIR5195-201ENST00000583555 115 ntBASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 AC005034.5-201ENST00000604219 466 ntBASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 AP000654.2-201ENST00000605633 586 ntBASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 AL591516.1-201ENST00000611326 274 ntBASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 AC090971.5-201ENST00000621102 293 ntBASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 AC004944.1-201ENST00000517807 3059 ntBASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SYNPOQ8N3V7 AC032011.1-201ENST00000611703 1549 ntBASIC3.9□□□□□ -1.78
SYNPOQ8N3V7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SYNPOQ8N3V7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SYNPOQ8N3V7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SYNPOQ8N3V7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.9□□□□□ -1.78
SYNPOQ8N3V7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 Y_RNA.146-201ENST00000363549 102 ntBASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 RNU6-336P-201ENST00000364891 107 ntBASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 Y_RNA.315-201ENST00000365117 102 ntBASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 Y_RNA.394-201ENST00000383942 103 ntBASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 AL161651.1-201ENST00000440882 223 ntBASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 FTH1P25-201ENST00000447665 469 ntBASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 RPS3AP46-201ENST00000448352 682 ntBASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 MTCO3P10-201ENST00000455912 772 ntBASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 RPL31P61-201ENST00000496160 376 ntBASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 AC104619.4-201ENST00000510773 249 ntBASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 MIR4644-201ENST00000579929 84 ntBASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 MIR4273-201ENST00000582824 84 ntBASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 AC024153.1-201ENST00000603103 365 ntBASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 MIR8058-201ENST00000615737 89 ntBASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 AC092608.2-201ENST00000624427 218 ntBASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms