Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AC104073.3-201ENST00000610942 955 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AL133173.2-201ENST00000614270 90 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 U6.42-201ENST00000618440 107 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 ZNF519P1-201ENST00000449011 1626 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 RNU6-661P-201ENST00000362409 107 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 MIR558-201ENST00000384920 94 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 AL359634.1-202ENST00000404721 284 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 RNA5SP338-201ENST00000410495 85 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 CDK8P2-201ENST00000415020 547 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 NDUFB4P7-201ENST00000423198 363 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 AL590383.1-201ENST00000428602 75 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 SNRPGP9-201ENST00000456025 225 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 AC027673.1-201ENST00000456245 405 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 MTCO2P18-201ENST00000457151 658 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 RPS27P26-201ENST00000494583 239 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 AC117532.1-201ENST00000514638 323 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 RNA5SP182-201ENST00000516064 82 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 Vault.3-201ENST00000516676 95 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 RNU6-64P-201ENST00000517119 105 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 AC022616.6-201ENST00000520479 119 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 ZNF519P3-201ENST00000557158 1032 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 AC073648.5-201ENST00000603502 305 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 AC245014.2-201ENST00000603689 287 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 AC246785.4-201ENST00000605374 287 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 AC087752.4-201ENST00000605911 462 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 AC108747.1-201ENST00000609508 535 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 AC005332.10-201ENST00000612725 619 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 U2.21-201ENST00000637295 81 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 AC099654.13-201ENST00000639774 207 ntBASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.76□□□□□ -2.13
COL27A1Q8IZC6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 MIR378A-201ENST00000362177 66 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 MIR1323-201ENST00000408090 73 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC114491.1-201ENST00000416095 246 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 BPY2DP-201ENST00000422208 265 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 HMGB1P31-201ENST00000437242 427 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC013267.1-201ENST00000458227 267 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC073901.1-201ENST00000462471 408 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 MRPS17P3-201ENST00000465453 385 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC010587.1-201ENST00000505809 469 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 MRPS36P2-201ENST00000512569 299 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 Y_RNA.695-201ENST00000516715 107 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 RNA5SP471-201ENST00000516971 106 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AP003181.2-201ENST00000528941 181 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 MIR4448-201ENST00000584360 86 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC008121.1-201ENST00000603244 268 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC025594.3-201ENST00000613068 790 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC130324.3-201ENST00000614165 542 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 TUG1_2.1-201ENST00000614234 87 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 MTND4P27-201ENST00000450813 1354 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC007785.2-201ENST00000598627 1916 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 Y_RNA.194-201ENST00000363985 102 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 RNA5SP240-201ENST00000365355 128 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 SNORA4.3-201ENST00000365564 137 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 SNORA67.5-201ENST00000391036 107 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 RPL23AP30-201ENST00000432419 501 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 RPL26P9-201ENST00000457466 433 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 RPL30P5-201ENST00000494923 336 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 MTCO3P7-201ENST00000510008 774 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC108729.3-201ENST00000513484 108 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 SNORA31.3-201ENST00000516029 96 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 RNU6-581P-201ENST00000516214 105 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 RNU6-1092P-201ENST00000516955 87 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC090572.1-201ENST00000519251 160 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 CBX3P4-201ENST00000538909 354 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 HMGB1P14-201ENST00000557424 591 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AC006362.1-201ENST00000567392 174 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AL356280.1-201ENST00000603614 379 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AL358072.1-201ENST00000604156 575 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 AL365204.3-201ENST00000612448 685 ntBASIC1.75□□□□□ -2.13
COL27A1Q8IZC6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms