Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC067747.1-201ENST00000608026 250 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 AC245008.1-201ENST00000608123 476 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 AC046143.2-201ENST00000609789 160 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 U6.114-201ENST00000636407 96 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 SNORA62.1-201ENST00000364287 154 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 SNORD115-7-201ENST00000365306 82 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 SNORA80E-201ENST00000384744 137 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 MIR454-201ENST00000390180 115 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 SNORA40C-201ENST00000391285 128 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 BTF3L4P1-201ENST00000413813 468 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 OR51A5P-201ENST00000415429 942 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AL513477.1-202ENST00000417061 214 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 USP9YP27-201ENST00000418455 438 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 MTCO2P11-201ENST00000431069 680 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 MYL8P-204ENST00000431574 518 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AL078601.1-201ENST00000444542 271 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC132479.1-201ENST00000449160 144 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC003071.1-201ENST00000451219 789 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC233279.1-201ENST00000455300 423 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 MTCO2P18-201ENST00000457151 658 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC022364.2-201ENST00000457963 554 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 TPT1P7-201ENST00000458300 517 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 TRBV1-201ENST00000476502 284 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC023194.1-201ENST00000493084 308 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 RPL37P25-201ENST00000507308 276 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC105313.1-201ENST00000509121 353 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC107222.1-201ENST00000510899 637 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 SNORD27.1-201ENST00000516319 72 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 OR4R1P-201ENST00000529879 463 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AL121821.2-201ENST00000556081 394 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 SUB1P2-201ENST00000556401 297 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC007151.1-201ENST00000572774 483 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC005261.5-201ENST00000596280 355 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC092656.1-203ENST00000624134 423 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC009161.2-201ENST00000624626 138 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 AC138915.1-201ENST00000565427 1685 ntBASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.2□□□□□ -2.06
C9orf40Q8IXQ3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 MIR21-201ENST00000362134 72 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 Z98749.2-208ENST00000381646 500 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 SNORA75B-201ENST00000384053 137 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 RNU6-166P-201ENST00000384371 107 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 RPS4XP7-201ENST00000406274 780 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 CALM2P2-201ENST00000428512 440 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 EEF1B2P7-201ENST00000451177 676 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 AL122001.1-201ENST00000457027 370 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 EIF4EP3-201ENST00000498782 656 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 AC104806.1-201ENST00000508720 308 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 SNORD19.2-201ENST00000516978 73 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 RNU6-685P-201ENST00000517088 95 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 MIR4513-201ENST00000581077 86 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 AC004908.3-201ENST00000610248 625 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 AC136475.10-201ENST00000620253 385 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 AC011155.2-201ENST00000623202 216 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 AL359740.1-201ENST00000624340 592 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 SEPT14P19-203ENST00000633205 211 ntBASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.19□□□□□ -2.06
C9orf40Q8IXQ3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
C9orf40Q8IXQ3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
C9orf40Q8IXQ3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
C9orf40Q8IXQ3 U8.8-201ENST00000365399 135 ntBASIC2.18□□□□□ -2.06
C9orf40Q8IXQ3 AL031779.1-201ENST00000415663 330 ntBASIC2.18□□□□□ -2.06
C9orf40Q8IXQ3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.18□□□□□ -2.06
C9orf40Q8IXQ3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.18□□□□□ -2.06
C9orf40Q8IXQ3 RPS15AP9-201ENST00000439856 381 ntBASIC2.18□□□□□ -2.06
C9orf40Q8IXQ3 AL161651.1-201ENST00000440882 223 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms