Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 RPS15AP9-201ENST00000439856 381 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AC020550.1-201ENST00000447385 163 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 RPS15AP27-201ENST00000449183 343 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AC011753.1-201ENST00000451001 220 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AC013267.1-201ENST00000458227 267 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 RNU6-420P-201ENST00000458780 107 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 RNU7-26P-201ENST00000458980 63 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 RNU7-23P-201ENST00000459465 62 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AC090515.1-201ENST00000465295 476 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 MRPL42P6-201ENST00000486397 371 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CKAP4Q07065 AF213884.2-201ENST00000510417 903 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AC009646.1-201ENST00000510455 318 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AL359273.1-201ENST00000510918 627 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 MRPS36P2-201ENST00000512569 299 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 SNORA31.3-201ENST00000516029 96 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 SNORD27.1-201ENST00000516319 72 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 RNU6-314P-201ENST00000516574 104 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 RNU6-928P-201ENST00000516876 104 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 RNU6-1092P-201ENST00000516955 87 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 NRON-201ENST00000517270 370 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.2□□□□□ -2.06
CKAP4Q07065 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.2□□□□□ -2.06
CKAP4Q07065 AC093012.1-202ENST00000549403 582 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 ANP32BP3-201ENST00000559213 706 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AC027807.1-201ENST00000559921 996 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AC005951.2-201ENST00000576282 495 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 MIR4319-201ENST00000577285 85 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 MTATP6P3-201ENST00000581686 676 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AC011471.1-201ENST00000585766 187 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AP001330.5-201ENST00000607176 411 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AC096577.2-201ENST00000611455 153 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 SDR42E1P2-201ENST00000614861 481 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AC010133.1-201ENST00000615809 842 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 U6atac.1-201ENST00000616025 117 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.2□□□□□ -2.06
CKAP4Q07065 FRG1KP-201ENST00000623592 341 ntBASIC2.2□□□□□ -2.06
CKAP4Q07065 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CKAP4Q07065 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.2□□□□□ -2.06
CKAP4Q07065 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CKAP4Q07065 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.19□□□□□ -2.06
CKAP4Q07065 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.19□□□□□ -2.06
CKAP4Q07065 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 RNU6-456P-201ENST00000384493 107 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 MIR1-2-201ENST00000384961 85 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 SUMO2P12-201ENST00000405924 140 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.19□□□□□ -2.06
CKAP4Q07065 AC018630.2-202ENST00000422992 927 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 RAC1P6-201ENST00000423911 575 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AC098614.2-201ENST00000426040 255 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AC092017.2-201ENST00000427600 362 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.19□□□□□ -2.06
CKAP4Q07065 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.19□□□□□ -2.06
CKAP4Q07065 MTATP6P30-201ENST00000443540 664 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.19□□□□□ -2.06
CKAP4Q07065 FGF7P6-202ENST00000451282 293 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 MTND2P24-201ENST00000453434 806 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.19□□□□□ -2.06
CKAP4Q07065 AC022364.2-201ENST00000457963 554 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AL135752.1-201ENST00000479477 471 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 RN7SL432P-201ENST00000484057 298 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AC079382.1-201ENST00000493346 557 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.19□□□□□ -2.06
CKAP4Q07065 AL117351.2-201ENST00000513571 157 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.19□□□□□ -2.06
CKAP4Q07065 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.19□□□□□ -2.06
CKAP4Q07065 AC109329.2-201ENST00000519658 482 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.19□□□□□ -2.06
CKAP4Q07065 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.19□□□□□ -2.06
CKAP4Q07065 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.19□□□□□ -2.06
CKAP4Q07065 HMGB1P33-201ENST00000563485 527 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.19□□□□□ -2.06
CKAP4Q07065 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.19□□□□□ -2.06
CKAP4Q07065 RPS3AP23-202ENST00000574601 686 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AP001094.1-201ENST00000579805 193 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AC098848.2-201ENST00000588023 330 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AL670379.6-201ENST00000603753 252 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AC025449.1-201ENST00000603896 529 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AL670379.11-201ENST00000604059 253 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AC008162.1-201ENST00000604718 254 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AL670379.1-201ENST00000604752 252 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AC007179.3-201ENST00000604976 235 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AL670379.5-201ENST00000605253 252 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AL670379.12-201ENST00000605291 253 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AL670379.8-201ENST00000605353 252 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AL670379.7-201ENST00000605823 252 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AC068944.2-201ENST00000610373 403 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AL442067.2-201ENST00000614033 363 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 uc_338.20-201ENST00000621563 178 ntBASIC2.19□□□□□ -2.06
CKAP4Q07065 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.19□□□□□ -2.06
CKAP4Q07065 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.19□□□□□ -2.06
CKAP4Q07065 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.19□□□□□ -2.06
CKAP4Q07065 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CKAP4Q07065 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
CKAP4Q07065 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CKAP4Q07065 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CKAP4Q07065 AC073343.1-201ENST00000328239 651 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 RNU5A-1-201ENST00000362698 116 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 Y_RNA.367-201ENST00000365544 101 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms